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Series GSE33059 Query DataSets for GSE33059
Status Public on Nov 01, 2011
Title Sequentially acting Sox transcription factors in neural lineage development [ChIP-seq]
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We report sequential binding but unique functions of different Sox transcription factors during distinct stages of neural differentiation
 
Overall design Examination of genome-wide Sox2, Sox3 and Sox11 transcription factor binding during different stages of neurogenesis.
 
Contributor(s) Bergsland M, Ramsköld D, Muhr J, Sandberg R
Citation(s) 22085726
Submission date Oct 18, 2011
Last update date May 15, 2019
Contact name Rickard Sandberg
E-mail(s) Rickard.Sandberg@ki.se
Organization name Karolinska Institutet
Department Department of Cell and Molecular Biology
Street address Berzelius vag 35
City Stockholm
ZIP/Postal code 17177
Country Sweden
 
Platforms (3)
GPL9250 Illumina Genome Analyzer II (Mus musculus)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (15)
GSM818936 Sox3 ChIP-Seq in neural progenitor cells, biol repl 1
GSM818937 Sox3 ChIP-Seq in neural progenitor cells, biol repl 2
GSM818938 Sox3 ChIP-Seq in neural progenitor cells, biol repl 3
This SubSeries is part of SuperSeries:
GSE33024 Sequentially acting Sox transcription factors in neural lineage development
Relations
SRA SRP009040
BioProject PRJNA154419

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE33059_RAW.tar 1.2 Gb (http)(custom) TAR (of BED)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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