|
| Status |
Public on Sep 19, 2011 |
| Title |
ENCODE SUNY RNA Binding Protein GeneST Data for GM12878 |
| Project |
ENCODE
|
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
|
| Summary |
RNA Binding Protein immunoprecipitation study for multiple target proteins in GM12878 cell line as part of the ENCODE consortium. Analyzed data tracks available for view on UCSC Genome browser.
For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf
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| |
|
| Overall design |
Three sample replicates per sample type. Total input RNA and Negative target RIP (antibody for bacteriophage coat protein) are provided as controls. Individual samples reflect biological replicates defined as separate RIP runs (as opposed to technical replicate defined as multiple arrays run with same RIP sample as starting material)
|
| Web link |
http://www.ncbi.nlm.nih.gov/geo/info/ENCODE.html
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| |
|
| Contributor(s) |
Tenenbaum SA, Penalva LO, Doyle FJ, Jayaseelan S, Chittur SV |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| BioProject |
PRJNA30709 |
| |
| Submission date |
Aug 29, 2011 |
| Last update date |
Jul 26, 2018 |
| Contact name |
Frank Doyle |
| Organization name |
UAlbany CNSE
|
| Department |
Nanobiology
|
| Lab |
Tenenbaum
|
| Street address |
257 Fuller Rd
|
| City |
Albany |
| State/province |
NY |
| ZIP/Postal code |
12203 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL6244 |
[HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] |
|
| Samples (21)
|
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| This SubSeries is part of SuperSeries: |
| GSE31724 |
ENCODE SUNY RNA Binding Protein GeneST Data for various cell lines |
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