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| Status |
Public on Jul 27, 2014 |
| Title |
Arabidopsis AGO5 contributes to a POL II-based RNA silencing pathway directing epigenetic marks |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
To characterise the Arabidopsis AGO5 protein, we report the AGO5 associated sRNAs, ago5 mutant total sRNAs and digital gene indexing tags with altered abundance in the ago5 mutant.
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| |
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| Overall design |
Examination of AGO5 associated sRNAs, population of total sRNAs in the ago5 mutant and characterisation of RNA transcripts with altered abundance in the ago5 mutant.
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| |
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| Contributor(s) |
Havecker ER, Taylor-Wallbridge LM, Fedito P, Hardcastle TJ, Heimstädt SB, Dunn RM, Baulcombe DC |
| Citation(s) |
23028873 |
| Submission date |
Jul 27, 2011 |
| Last update date |
Sep 19, 2019 |
| Contact name |
Krys Kelly |
| Organization name |
University of Cambridge
|
| Department |
Plant Sciences
|
| Lab |
Baulcombe Group
|
| Street address |
Downing Street
|
| City |
Cambridge |
| ZIP/Postal code |
CB2 3EA |
| Country |
United Kingdom |
| |
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| Platforms (1) |
| GPL9302 |
Illumina Genome Analyzer II (Arabidopsis thaliana) |
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| Samples (7)
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| Relations |
| SRA |
SRP007581 |
| BioProject |
PRJNA146209 |
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