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| Status |
Public on Jun 23, 2011 |
| Title |
Expression data of wild-type C. elegans shifted from 23 degrees to 17 degrees |
| Organism |
Caenorhabditis elegans |
| Experiment type |
Expression profiling by array
|
| Summary |
C. elegans exhibits thermotaxis, where most of the animals that had been cultivated at a particular temperature ranging from 15°C to 25°C for a few hours with a food source and then placed on a thermal gradient for an hour migrate to the cultivation temperature. In addition, animals that were previously conditioned to migrate to a certain temperature are capable of migrating to a new cultivation temperature a few hours after the cultivation temperature was shifted to the new temperature
To gain the detailed molecular insight into thermotactic behavior, the genome-wide microarray analysis during behavioral conditioning was performed. We compared the transcriptional profile of animals conditioned to migrate to the new temperature 17°C with that of animals conditioned to migrate to the previous temperature 23°C
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| Overall design |
Synchronized adult wild-type animals cultivated at 23 degrees were selected for RNA extraction and hybridization on Affymetrix microarrays.
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| Contributor(s) |
Sugi T, Mori I |
| Citation(s) |
21706021 |
| |
| Submission date |
Apr 26, 2011 |
| Last update date |
Jul 06, 2016 |
| Contact name |
Takuma Sugi |
| Organization name |
Kyoto University
|
| Street address |
Yoshida Honmachi
|
| City |
Kyoto |
| ZIP/Postal code |
606-8501 |
| Country |
Japan |
| |
|
| Platforms (1) |
| GPL200 |
[Celegans] Affymetrix C. elegans Genome Array |
|
| Samples (12)
|
| GSM714598 |
Wild-type 0 h after shifting temperature rep1 |
| GSM714599 |
Wild-type 4 h after shifting temperature rep1 |
| GSM714600 |
Wild-type 0 h after shifting temperature rep2 |
| GSM714601 |
Wild-type 4 h after shifting temperature rep2 |
| GSM714602 |
Wild-type 0 h after shifting temperature rep3 |
| GSM714603 |
Wild-type 4 h after shifting temperature rep3 |
| GSM714604 |
Wild-type 0 h after shifting temperature rep4 |
| GSM714605 |
Wild-type 4 h after shifting temperature rep4 |
| GSM714606 |
Wild-type 1 h after shifting temperature rep1 |
| GSM714607 |
Wild-type 2 h after shifting temperature rep1 |
| GSM714608 |
Wild-type 1 h after shifting temperature rep2 |
| GSM714609 |
Wild-type 2 h after shifting temperature rep2 |
|
| Relations |
| BioProject |
PRJNA140687 |
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