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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Mar 21, 2024 |
| Title |
A whole-genome CRISPR screen identifies the spindle accessory checkpoint as a locus of nab-paclitaxel resistance in pancreatic cancer cells. |
| Organism |
Homo sapiens |
| Experiment type |
Other
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| Summary |
Pancreatic adenocarcinoma is one of the most aggressive and lethal forms of cancer. Chemotherapy is the primary treatment for pancreatic cancer, but resistance to the drugs used remains a major challenge. A genome-wide CRISPR interference and knockout screen in the PANC-1 cell line with the drug nab-paclitaxel has identified a group of spindle assembly checkpoint (SAC) genes that enhance survival in nab-paclitaxel. Knockdown of these SAC genes (BUB1B, BUB3, and TTK) attenuates paclitaxel-induced cell death. Cells treated with the small molecule inhibitors BAY 1217389 or MPI 0479605, targeting the threonine tyrosine kinase (TTK), also enhance survival in paclitaxel. Overexpression of these SAC genes does not affect sensitivity to paclitaxel. These discoveries have helped to elucidate the mechanisms behind paclitaxel cytotoxicity. The outcomes of this investigation may pave the way for a deeper comprehension of the diverse responses of pancreatic cancer to therapies including paclitaxel. Additionally, they could facilitate the formulation of novel treatment approaches for pancreatic cancer.
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| Overall design |
Whole Genome CRISPR SCREEN
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| Contributor(s) |
Mondal P, Alyateem G, Mitchell AV, Gottesman MM |
| Citation(s) |
38987356 |
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| Submission date |
Mar 21, 2024 |
| Last update date |
Jul 21, 2024 |
| Contact name |
PRIYA MONDAL |
| E-mail(s) |
priya.mondal@nih.gov
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| Phone |
(240) 630-9468
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| Organization name |
NCI
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| Street address |
37 Convent Dr.
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| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20892 |
| Country |
USA |
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| Platforms (1) |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA1090475 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE262149_RAW.tar |
8.7 Mb |
(http)(custom) |
TAR (of TXT) |
SRA Run Selector |
| Raw data are available in SRA |
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