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Series GSE231601 Query DataSets for GSE231601
Status Public on May 31, 2023
Title Chromosomal instability causes sensitivity to polyamines and one-carbon metabolism
Organism Drosophila melanogaster
Experiment type Expression profiling by high throughput sequencing
Summary Aneuploidy, having an unbalanced genome, is an aberration commonly found in tumours but rare in normal tissues. It gives rise to proteotoxic stress as well as a stereotypical oxidative shift which makes these cells sensitive to internal and environmental stresses. Using Drosophila as a model, we investigated the changes in transcription in response to ongoing changes to ploidy (chromosomal instability, CIN). We noticed changes in genes affecting one-carbon metabolism, specifically those affecting the production and use of s-adenosyl methionine (SAM). Depletion of several of these genes led to cell death by apoptosis in CIN cells, but not normal proliferating cells. We found that CIN cells are particularly sensitive to SAM metabolism at least partly because of its role in generating polyamines. Feeding animals spermine was seen to rescue the cell death caused by loss of SAM synthase in CIN tissues. Loss of polyamines led to decreased rates of autophagy and sensitivity to reactive oxygen species (ROS), which we have shown contribute significantly to cell death in CIN cells. These findings suggest that a well-tolerated metabolic intervention like polyamine inhibition has the potential to target CIN tumours via a relatively well characterized mechanism.
 
Overall design Samples are RNASeq preps from CIN (Mad2 mutant) and non-CIN (Mad2 heterozygote) Drosophila larvae. Five replicates from each genotype were used, with 15 animals in each replicate
 
Contributor(s) Gregory SL, Newman DL, Shaukat Z
Citation(s) 37233683
Submission date May 03, 2023
Last update date May 31, 2023
Contact name Stephen L Gregory
E-mail(s) stephen.gregory@flinders.edu.au
Phone 0466987583
Organization name Flinders University
Department Molecular Medicine
Street address Sturt Road
City Bedford Park
State/province South Australia
ZIP/Postal code 5042
Country Australia
 
Platforms (1)
GPL25244 Illumina NovaSeq 6000 (Drosophila melanogaster)
Samples (11)
GSM7291420 CIN rep1
GSM7291421 CIN rep2
GSM7291422 CIN rep3
Relations
BioProject PRJNA966989

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Supplementary file Size Download File type/resource
GSE231601_RNASeq_Mad2_vs_Control_TE_and_GE.xlsx 26.4 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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