|
| Status |
Public on Mar 20, 2024 |
| Title |
Endocardial HDAC3 is required for myocardial trabeculation |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
38755146 |
| NIH grant(s) |
| Grant ID |
Grant title |
Affiliation |
Name |
| R01 HL153406 |
Cardiac regeneration by histone deacetylases |
UNIVERSITY OF MARYLAND, BALTIMORE, OFFICE OF RESEARCH AND DEVELOPMENT |
Deqiang Li |
|
| |
| Submission date |
Apr 13, 2023 |
| Last update date |
May 31, 2024 |
| Contact name |
Deqiang Li |
| Organization name |
Nationwide Children's Hospital
|
| Lab |
Li Lab
|
| Street address |
575 Children’s Crossroad, WB4321
|
| City |
COLUMBUS |
| State/province |
Ohio |
| ZIP/Postal code |
43215 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
| GPL21103 |
Illumina HiSeq 4000 (Mus musculus) |
|
| Samples (22)
|
| GSM7170115 |
Mouse Cardiac Endothelial Cell - Empty vector (EV) - rep1 |
| GSM7170116 |
Mouse Cardiac Endothelial Cell - Empty vector (EV) - rep2 |
| GSM7170117 |
Mouse Cardiac Endothelial Cell - Empty vector (EV) - rep3 |
| GSM7170118 |
Mouse Cardiac Endothelial Cell - Hdac3 Crispr/cas9 Knockout (KO) - rep1 |
| GSM7170119 |
Mouse Cardiac Endothelial Cell - Hdac3 Crispr/cas9 Knockout (KO) - rep2 |
| GSM7170120 |
Mouse Cardiac Endothelial Cell - Hdac3 Crispr/cas9 Knockout (KO) - rep3 |
| GSM7170121 |
H3CTL_1 |
| GSM7170122 |
H3CTL_2 |
| GSM7170123 |
H3CTL_3 |
| GSM7170124 |
H3CTL_4 |
| GSM7170125 |
H3KO_1 |
| GSM7170126 |
H3KO_2 |
| GSM7170127 |
H3KO_3 |
| GSM7170128 |
H3KO_4 |
| GSM7172754 |
Bulk RNA_Mouse Cardiac Endothelial Cell - Empty vector (EV) - rep1 |
| GSM7172755 |
Bulk RNA_Mouse Cardiac Endothelial Cell - Empty vector (EV) - rep2 |
| GSM7172756 |
Bulk RNA_Mouse Cardiac Endothelial Cell - Empty vector (EV) - rep3 |
| GSM7172757 |
Bulk RNA_Mouse Cardiac Endothelial Cell - Empty vector (EV) - rep4 |
| GSM7172758 |
Bulk RNA_Mouse Cardiac Endothelial Cell - Hdac3 Crispr/cas9 Knockout (KO) - rep1 |
| GSM7172759 |
Bulk RNA_Mouse Cardiac Endothelial Cell - Hdac3 Crispr/cas9 Knockout (KO) - rep2 |
| GSM7172760 |
Bulk RNA_Mouse Cardiac Endothelial Cell - Hdac3 Crispr/cas9 Knockout (KO) - rep3 |
| GSM7172762 |
Bulk RNA_Mouse Cardiac Endothelial Cell - Hdac3 Crispr/cas9 Knockout (KO) - rep4 |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE229659 |
Endocardial HDAC3 is required for myocardial trabeculation [miRNA-seq] |
| GSE229660 |
Endocardial HDAC3 is required for myocardial trabeculation [single-cell RNA-seq] |
| GSE229677 |
Endocardial HDAC3 is required for myocardial trabeculation [bulk RNA-seq] |
|
| Relations |
| BioProject |
PRJNA955253 |
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