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Series GSE216595 Query DataSets for GSE216595
Status Public on Jan 05, 2023
Title A Transcription Factor Atlas of Directed Differentiation [10XscRNA_180124_perturb]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Other
Summary 10X single-cell RNA-seq data profiling hESCs overexpressing transcription factors
 
Overall design hESCs were transduced with a library of 90 transcription factor ORFs and cultured for 7 days before single-cell RNA-seq
 
Contributor(s) Joung J, Zhang F
Citation(s) 36608654
Submission date Oct 26, 2022
Last update date Feb 02, 2023
Contact name Julia Joung
E-mail(s) julia@joung.science
Organization name Broad Institute
Street address 75 Ames St
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platforms (1)
GPL21697 NextSeq 550 (Homo sapiens)
Samples (9)
GSM6681039 180124_perturb_S1
GSM6681040 180124_perturb_S2
GSM6681041 180124_perturb_S3
This SubSeries is part of SuperSeries:
GSE216481 A Transcription Factor Atlas of Directed Differentiation
Relations
BioProject PRJNA894481

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE216595_180124_perturb.h5ad.gz 1.4 Gb (ftp)(http) H5AD
GSE216595_RAW.tar 671.0 Mb (http)(custom) TAR (of CSV, MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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