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Series GSE208144 Query DataSets for GSE208144
Status Public on Jul 17, 2024
Title Epigallocatechin Gallate modulates microglia phenotype
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We have identified Epigallocatechin Gallate (EGCG) as a potent modulator of microglia function. Our aim was to determine whether EGCG affects the transcriptome of microglia and identify genes and gene sets that may underly the effects of EGCG on microglia function.
 
Overall design Comparative gene expression profiling analysis of RNA-seq data for primary murine (CD1) microglia treated with 1uM EGCG or equivalent DMSO control for 24 hours in serum free media. 2 indendent biological replicates were included for both treatment conditions.
 
Contributor(s) Regan P, Sero J, Williams RJ
Citation(s) 38095777
Submission date Jul 13, 2022
Last update date Jul 17, 2024
Contact name Robert J Williams
E-mail(s) rjw38@bath.ac.uk
Organization name University of Bath
Street address University Of Bath, The Avenue, Claverton Down
City Bath
ZIP/Postal code BA2 7AY
Country United Kingdom
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (4)
GSM6338079 Microglia, EGCG, biol rep 1
GSM6338080 Microglia, Vehicle, biol rep 1
GSM6338081 Microglia, EGCG, biol rep 2
Relations
BioProject PRJNA858466

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE208144_gene_count_rep1.csv.gz 2.0 Mb (ftp)(http) CSV
GSE208144_gene_count_rep2.csv.gz 1.9 Mb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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