|
| Status |
Public on Jun 25, 2022 |
| Title |
LDL delivery of microbial small RNAs drives atherosclerosis through macrophage TLR8 |
| Organisms |
Homo sapiens; Mus musculus |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
Expression profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
36474072 |
| |
| Submission date |
Jun 24, 2022 |
| Last update date |
Nov 13, 2023 |
| Contact name |
Ryan M Allen |
| E-mail(s) |
ryan.m.allen@vumc.org
|
| Phone |
3146109328
|
| Organization name |
Vanderbilt University Medical Center
|
| Department |
Medicine
|
| Lab |
Vickers
|
| Street address |
2220 Pierce Ave
|
| City |
Nashville |
| State/province |
TN |
| ZIP/Postal code |
37232 |
| Country |
USA |
| |
|
| Platforms (4)
|
| GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
| Samples (50)
|
|
| This SuperSeries is composed of the following SubSeries:
|
| GSE160615 |
High-throughput RNA Sequencing of THP-1 macrophages treated with or without native LDL for 24h. |
| GSE160616 |
Small RNA sequencing of human LDL |
| GSE160791 |
The influence of nt-LNA on cell composition and phenotypees in the atherosclerotic lesion. |
| GSE206857 |
Small RNA sequencing of lipoproteins (HDL) obtained from germ-free mice and facility matched specific-pathogen free mice. |
|
| Relations |
| BioProject |
PRJNA852513 |
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