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Series GSE186687 Query DataSets for GSE186687
Status Public on Jan 25, 2023
Title Histone variant H3.3 facilitates open chromatin at promoters.
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 36782260
NIH grant(s)
Grant ID Grant title Affiliation Name
R01 HD109239 Mechanisms of p300 Activation During Pluripotency and Differentiation. UT SOUTHWESTERN MEDICAL CENTER Laura Banaszynski
R35 GM124958 Chromatin Dynamics and Genome Regulation UT SOUTHWESTERN MEDICAL CENTER Laura Banaszynski
Submission date Oct 27, 2021
Last update date Feb 20, 2023
Contact name Laura Banaszynski
E-mail(s) Laura.banaszynski@utsouthwestern.edu
Organization name UT Southwestern Medical Center
Department Green Center for Reproductive Biology Sciences
Street address 5323 Harry Hines Blvd
City Dallas
State/province TX
ZIP/Postal code 75390-8511
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (44)
GSM5658960 ESC_H33WT_ATAC-Seq rep2
GSM5658961 ESC_H33KO_ATAC-Seq rep2
GSM5658962 EB_H33WT_ATAC-Seq_rep1
This SuperSeries is composed of the following SubSeries:
GSE186684 Histone variant H3.3 facilitates open chromatin at promoters [ATAC-seq]
GSE186685 Histone variant H3.3 facilitates open chromatin at promoters [ChIP-seq]
GSE186686 Histone variant H3.3 facilitates open chromatin at promoters [GRO-seq]
Relations
BioProject PRJNA775061

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE186687_RAW.tar 4.4 Gb (http)(custom) TAR (of BW)
SRA Run SelectorHelp

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