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Series GSE185648 Query DataSets for GSE185648
Status Public on Aug 04, 2022
Title Ku70/HP1g are presented at the KCl induced acutely activated enhancers [ChIP-seq]
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Ku70/HP1g are serving as the marker for the KCl induced acutely enhancer activation in cortical neurons.
 
Overall design All ChIP-Seq experiments were designed to investigate the Ku70/HP1g signals at KCl induced neuronal active enhancers.
 
Contributor(s) Tan Y
Citation(s) 36747093
Submission date Oct 11, 2021
Last update date Jun 01, 2023
Contact name Yuliang Tan
E-mail(s) yut020@ucsd.edu
Organization name University of California, San Diego
Department School of Medicine
Street address Room 345, CMM West, 9500 Gilman Drive, Mail Code 0648
City La Jolla
State/province California
ZIP/Postal code 92037-0648
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (20)
GSM5621128 H3K27ac_KCl_0min
GSM5621129 H3K27ac_KCl_15min
GSM5621130 H3K27ac_KCl_30min
This SubSeries is part of SuperSeries:
GSE135808 Topoisomerase 1 Nicking-dependent HP1gamma Engagement Mediates Acute Activation of Phase-separated Enhancers
Relations
BioProject PRJNA770274
SRA SRP340821

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE185648_RAW.tar 6.3 Gb (http)(custom) TAR (of BED, BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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