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Series GSE135808 Query DataSets for GSE135808
Status Public on Aug 04, 2022
Title Topoisomerase 1 Nicking-dependent HP1gamma Engagement Mediates Acute Activation of Phase-separated Enhancers
Organisms Homo sapiens; Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
Overall design Refer to individual Series
Citation(s) 36747093
Submission date Aug 14, 2019
Last update date Jun 01, 2023
Contact name Yuliang Tan
Organization name University of California, San Diego
Department School of Medicine
Street address Room 345, CMM West, 9500 Gilman Drive, Mail Code 0648
City La Jolla
State/province California
ZIP/Postal code 92037-0648
Country USA
Platforms (4)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (167)
GSM4015597 PRO-seq_siNC_E2_1h_exp1
GSM4015598 PRO-seq_siNC_E2_1h_exp2
GSM4015599 PRO-seq_siNC_Veh_1h_exp1
This SuperSeries is composed of the following SubSeries:
GSE135540 PRO-seq assay in human breast cancer MCF7 cells
GSE135723 TOP1cc-seq assay in human cancer cells
GSE135807 ChIP-seq assay in human cancer cells
BioProject PRJNA560174

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE135808_RAW.tar 37.3 Gb (http)(custom) TAR (of BED, BEDGRAPH, BIGWIG)
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