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GEO accession:
Series GSE184461
Query DataSets for GSE184461
Status
Public on Jul 13, 2022
Title
Activation of g-globin expression by hypoxia-inducible factor 1a
Organism
Homo sapiens
Experiment type
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Other
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
36224385
Submission date
Sep 20, 2021
Last update date
Oct 28, 2022
Contact name
Mitchell J Weiss
E-mail(s)
mitch.weiss@stjude.org
Phone
9015958351
Organization name
St. Jude Children's Research Hospital
Street address
262 Danny Thomas Place
City
Memphis
State/province
TN
ZIP/Postal code
38105
Country
USA
Platforms (2)
GPL20301
Illumina HiSeq 4000 (Homo sapiens)
GPL21697
NextSeq 550 (Homo sapiens)
Samples (105)
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More...
GSM5589334
NT_rep1
GSM5589335
NT_rep2
GSM5589336
VKO_rep1
GSM5589337
VKO_rep2
GSM6199412
CD34_NT_ATAC_rep1
GSM6199413
CD34_NT_ATAC_rep2
GSM6199414
CD34_VHLKO_ATAC_rep1
GSM6199415
CD34_VHLKO_ATAC_rep2
GSM6199416
HUDEP2_WT_ATAC_rep1
GSM6199417
HUDEP2_WT_ATAC_rep2
GSM6199418
HUDEP2_VHLKO_ATAC_clone1
GSM6199419
HUDEP2_VHLKO_ATAC_clone2
GSM6199426
CaptureC_NT_BGLT3_rep1
GSM6199427
CaptureC_NT_BGLT3_rep2
GSM6199428
CaptureC_NT_HBBP1_rep1
GSM6199429
CaptureC_NT_HBBP1_rep2
GSM6199430
CaptureC_NT_HS3_rep1
GSM6199431
CaptureC_NT_HS3_rep2
GSM6199432
CaptureC_VHLKO_BGLT3_rep1
GSM6199433
CaptureC_VHLKO_BGLT3_rep2
GSM6199434
CaptureC_VHLKO_HBBP1_rep1
GSM6199435
CaptureC_VHLKO_HBBP1_rep2
GSM6199436
CaptureC_VHLKO_HS3_rep1
GSM6199437
CaptureC_VHLKO_HS3_rep2
GSM6199438
combined_NT_BCL11A rep1
GSM6199439
combined_NT_BCL11A rep2
GSM6199440
combined_VHLKO_BCL11A rep1
GSM6199441
combined_VHLKO_BCL11A rep2
GSM6199442
A549_NT_HIF1A
GSM6199443
A549_NT_HIF2A
GSM6199444
A549_VHLKO_HIF2A
GSM6199445
A549_VHLKO1_HIF1A
GSM6199446
Baseeditor_Clone1_MotifA_HIF1A
GSM6199447
Baseeditor_Clone1_MotifAB_HIF1A
GSM6199448
Baseeditor_Clone1_MotifB_HIF1A
GSM6199449
Baseeditor_Clone1_NT_HIF1A
GSM6199450
Baseeditor_Clone2_MotifA_HIF1A
GSM6199451
Baseeditor_Clone2_MotifAB_HIF1A
GSM6199452
Baseeditor_Clone2_MotifB_HIF1A
GSM6199453
Baseeditor_Clone2_NT_HIF1A
GSM6199454
CD34_FG4592_HIF1A_rep1
GSM6199455
CD34_FG4592_HIF1A_rep2
GSM6199456
CD34_NT_GATA1_rep1
GSM6199457
CD34_NT_GATA1_rep2
GSM6199458
CD34_NT_H3K27ac_Rep1
GSM6199459
CD34_NT_H3K27ac_rep2
GSM6199460
CD34_NT_H3K4me1_rep1
GSM6199461
CD34_NT_H3K4me1_rep2
GSM6199462
CD34_NT_H3K4me3_rep1
GSM6199463
CD34_NT_H3K4me3_rep2
GSM6199464
CD34_NT_HIF1A_rep1
GSM6199465
CD34_NT_HIF1A_rep2
GSM6199466
CD34_NT_HIF1b_rep1
GSM6199467
CD34_NT_HIF1b_rep2
GSM6199468
CD34_NT_HIF2A
GSM6199469
CD34_NT_P300_rep1
GSM6199470
CD34_NT_P300_rep2
GSM6199471
CD34_Vehicle_HIF1A
GSM6199472
CD34_VHLKO_GATA1_rep1
GSM6199473
CD34_VHLKO_GATA1_rep2
GSM6199474
CD34_VHLKO_H3K27ac_Rep1
GSM6199475
CD34_VHLKO_H3K27ac_rep2
GSM6199476
CD34_VHLKO_H3K4me1_rep1
GSM6199477
CD34_VHLKO_H3K4me1_Rep2
GSM6199478
CD34_VHLKO_H3K4me3_rep1
GSM6199479
CD34_VHLKO_H3K4me3_rep2
GSM6199480
CD34_VHLKO_HIF1A_rep1
GSM6199481
CD34_VHLKO_HIF1A_rep2
GSM6199482
CD34_VHLKO_HIF1b_rep1
GSM6199483
CD34_VHLKO_HIF1b_rep2
GSM6199484
CD34_VHLKO_HIF2A_Rep1
GSM6199485
CD34_VHLKO_HIF2A_Rep2
GSM6199486
CD34_VHLKO_IgG
GSM6199487
CD34_VHLKO_P300_rep1
GSM6199488
CD34_VHLKO_P300_rep2
GSM6199489
HUDEP2_NT_GATA1_rep2
GSM6199490
HUDEP2_NT_H3K27ac_rep2
GSM6199491
HUDEP2_NT_H3K4me1_rep2
GSM6199492
HUDEP2_NT_H3K4me3_rep2
GSM6199493
HUDEP2_NT_HIF1A_rep2
GSM6199494
HUDEP2_NT_HIF1b_rep2
GSM6199495
HUDEP2_NT_P300_rep2
GSM6199496
HUDEP2_NT_rep1_GATA1
GSM6199497
HUDEP2_NT_rep1_H3K27ac
GSM6199498
HUDEP2_NT_rep1_H3K4me1
GSM6199499
HUDEP2_NT_rep1_H3K4me3
GSM6199500
HUDEP2_NT_rep1_HIF1A
GSM6199501
HUDEP2_NT_rep1_HIF1b
GSM6199502
HUDEP2_NT_rep1_P300
GSM6199503
HUDEP2_VHLKO_clone1_GATA1
GSM6199504
HUDEP2_VHLKO_clone1_H3K27ac
GSM6199505
HUDEP2_VHLKO_clone1_H3K4me1
GSM6199506
HUDEP2_VHLKO_clone1_H3K4me3
GSM6199507
HUDEP2_VHLKO_clone1_HIF1A
GSM6199508
HUDEP2_VHLKO_clone1_HIF1b
GSM6199509
HUDEP2_VHLKO_clone1_P300
GSM6199510
HUDEP2_VHLKO_GATA1_clone2
GSM6199511
HUDEP2_VHLKO_H3K27ac_clone2
GSM6199512
HUDEP2_VHLKO_H3K4me1_clone2
GSM6199513
HUDEP2_VHLKO_H3K4me3_clone2
GSM6199514
HUDEP2_VHLKO_HIF1A_clone2
GSM6199515
HUDEP2_VHLKO_HIF1b_clone2
GSM6199516
HUDEP2_VHLKO_P300_clone2
GSM6199517
CD34_NT_IgG
GSM6199518
HUDEP2_NT_IgG
This SuperSeries is composed of the following SubSeries:
Less...
More...
GSE184459
Activation of g-globin expression by hypoxia-inducible factor 1a [RNA-seq]
GSE204897
Activation of g-globin expression by hypoxia-inducible factor 1a [ATAC-Seq]
GSE204899
Activation of g-globin expression by hypoxia-inducible factor 1a [CaptureC]
GSE204900
Activation of g-globin expression by hypoxia-inducible factor 1a [CUT&RUN]
Relations
BioProject
PRJNA764707
Download family
Format
SOFT formatted family file(s)
SOFT
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TXT
Supplementary file
Size
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File type/resource
GSE184461_RAW.tar
9.8 Gb
(http)
(custom)
TAR (of BEDGRAPH, BW, TSV)
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