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Series GSE184125 Query DataSets for GSE184125
Status Public on Oct 31, 2021
Title 9-ING-41, a small molecule inhibitor of GSK-3β, potentiates the effects of chemotherapy in KRAS mutated colorectal cancer
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Despite the prevalence of KRAS mutations in colorectal cancer, there is no K-Ras targeted therapies for these tumors and available treatment options are limited for metastatic disease. GSK-3β has been demonstrated to be a critically important kinase for survival and proliferation of K-Ras-depended pancreatic cancer cells. In this study we tested 9-ING-41, a small molecule inhibitor of GSK-3β, in patient-derived tumor organoid models of colorectal cancer. We demonstrated that addition of 9-ING-41 to the standard of care drugs 5-FU and oxaliplatin could significantly enhance inhibition of the growth of colorectal cancer cells harboring KRAS mutations. The results of the transcriptomic analysis support our findings of cell cycle arrest and DNA repair deficiency in 9-ING-41-treated colorectal cancer cells. Moreover, we found substantial similarity in the changes of transcriptomic profile after inhibition of GSK-3β and suppression of STK33, another critically important kinase for K-Ras-dependent cells. Overall, the results of this study provide a rationale for the inclusion of patients with mutant KRAS colorectal cancer in clinical studies of 9-ING-41 and other GSK-3 inhibitors.
 
Overall design Total mRNA profiles of 9-ING-41 treated and control colorectal tumor organoids.
 
Contributor(s) Nikulin S
Citation(s) 34955846
Submission date Sep 14, 2021
Last update date Jan 10, 2022
Contact name Sergey Nikulin
Organization name HSE University
Department Faculty of Biology and Biotechnology
Lab International Laboratory of Microphysiological Systems
Street address 7, Vavilova st.
City Moscow
ZIP/Postal code 117312
Country Russia
 
Platforms (1)
GPL21697 NextSeq 550 (Homo sapiens)
Samples (6)
GSM5578278 TO Patient1 9-ING-41 rep1
GSM5578279 TO Patient1 9-ING-41 rep2
GSM5578280 TO Patient1 9-ING-41 rep3
Relations
BioProject PRJNA763229
SRA SRP337068

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE184125_Raw_gene_counts_matrix.txt.gz 511.9 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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