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| Status |
Public on Feb 20, 2010 |
| Title |
Time course expression data from early Bovine embryo, Human embryo, and Mouse embryo |
| Organisms |
Homo sapiens; Bos taurus; Mus musculus |
| Experiment type |
Expression profiling by array
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| Summary |
The process of early development of mammals is subtly and accurately controlled by the regulation networks of embryo cells. Time course expression data measured at different stages during early embryo development process can give us valuable information by revealing the dynamic expression patterns of genes in genome wide scale. In this study, bovine embryo expression data were generated at oocyte, one cell stage, two cell stage, four cell stage, eight cell stage, sixteen cell stage, morula, and blastocyst; Human embryo expression data were generated at one cell stage, two cell stage, four cell stage, eight cell stage, morula, and blastocyst; Mouse embryo expression data were generated at one cell stage, two cell stage, four cell stage, eight cell stage, morula, and blastocyst.
Keywords: time course
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| Overall design |
Bovine, Human, and Mouse embryos were harvested at successive stage from oocyte to blastocyste. Total RNAs were extracted, amplified and hybridized onto Affymetrix microarrays.
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| Contributor(s) |
Xie D |
| Citation(s) |
20219939 |
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| Submission date |
Sep 25, 2009 |
| Last update date |
Mar 25, 2019 |
| Contact name |
Dan Xie |
| E-mail(s) |
danxie2@uiuc.edu
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| Organization name |
University of Illinois at Urbana and Champaign
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| Department |
Bioengineering
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| Street address |
3215 Digital Computer Lab, MC-278, 1304 W. Springfield Ave
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| City |
Urbana |
| State/province |
IL |
| ZIP/Postal code |
61801 |
| Country |
USA |
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| Platforms (3) |
| GPL339 |
[MOE430A] Affymetrix Mouse Expression 430A Array |
| GPL570 |
[HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array |
| GPL2112 |
[Bovine] Affymetrix Bovine Genome Array |
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| Samples (52)
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| GSM456627 |
bovine oocyte, biological rep 1 |
| GSM456628 |
bovine oocyte, biological rep 2 |
| GSM456629 |
bovine embryo at 1 cell stage, biological rep 1 |
| GSM456630 |
bovine embryo at 1 cell stage, biological rep 2 |
| GSM456631 |
bovine embryo at 2 cell stage, biological rep 1 |
| GSM456632 |
bovine embryo at 2 cell stage, biological rep 2 |
| GSM456633 |
bovine embryo at 4 cell stage, biological rep 1 |
| GSM456634 |
bovine embryo at 4 cell stage, biological rep 2 |
| GSM456635 |
bovine embryo at 8 cell stage, biological rep 1 |
| GSM456636 |
bovine embryo at 8 cell stage, biological rep 2 |
| GSM456637 |
bovine embryo at 16 cell stage, biological rep 1 |
| GSM456638 |
bovine embryo at 16 cell stage, biological rep 2 |
| GSM456639 |
bovine embryo at morula stage, biological rep 1 |
| GSM456640 |
bovine embryo at morula stage, biological rep 2 |
| GSM456641 |
bovine blastocyst, biological rep 1 |
| GSM456642 |
bovine blastocyst, biological rep 2 |
| GSM456643 |
human embryo at 1 cell stage, biological rep 1 |
| GSM456644 |
human embryo at 1 cell stage, biological rep 2 |
| GSM456645 |
human embryo at 1 cell stage, biological rep 3 |
| GSM456646 |
human embryo at 2 cell stage, biological rep 1 |
| GSM456647 |
human embryo at 2 cell stage, biological rep 2 |
| GSM456648 |
human embryo at 2 cell stage, biological rep 3 |
| GSM456649 |
human embryo at 4 cell stage, biological rep 1 |
| GSM456650 |
human embryo at 4 cell stage, biological rep 2 |
| GSM456651 |
human embryo at 4 cell stage, biological rep 3 |
| GSM456652 |
human embryo at 8 cell stage, biological rep 1 |
| GSM456653 |
human embryo at 8 cell stage, biological rep 2 |
| GSM456654 |
human embryo at 8 cell stage, biological rep 3 |
| GSM456655 |
human embryo at morula stage, biological rep 1 |
| GSM456656 |
human embryo at morula stage, biological rep 2 |
| GSM456657 |
human embryo at morula stage, biological rep 3 |
| GSM456658 |
human blastocyst, biological rep 1 |
| GSM456659 |
human blastocyst, biological rep 2 |
| GSM456660 |
human blastocyst, biological rep 3 |
| GSM456661 |
mouse embryo at 1 cell stage, biological rep 1 |
| GSM456662 |
mouse embryo at 1 cell stage, biological rep 2 |
| GSM456663 |
mouse embryo at 1 cell stage, biological rep 3 |
| GSM456664 |
mouse embryo at 2 cell stage, biological rep 1 |
| GSM456665 |
mouse embryo at 2 cell stage, biological rep 2 |
| GSM456666 |
mouse embryo at 2 cell stage, biological rep 3 |
| GSM456667 |
mouse embryo at 4 cell stage, biological rep 1 |
| GSM456668 |
mouse embryo at 4 cell stage, biological rep 2 |
| GSM456669 |
mouse embryo at 4 cell stage, biological rep 3 |
| GSM456670 |
mouse embryo at 8 cell stage, biological rep 1 |
| GSM456671 |
mouse embryo at 8 cell stage, biological rep 2 |
| GSM456672 |
mouse embryo at 8 cell stage, biological rep 3 |
| GSM456673 |
mouse embryo at morula stage, biological rep 1 |
| GSM456674 |
mouse embryo at morula stage, biological rep 2 |
| GSM456675 |
mouse embryo at morula stage, biological rep 3 |
| GSM456676 |
mouse blastocyst, biological rep 1 |
| GSM456677 |
mouse blastocyst, biological rep 2 |
| GSM456678 |
mouse blastocyst, biological rep 3 |
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| Relations |
| BioProject |
PRJNA117925 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE18290_RAW.tar |
171.6 Mb |
(http)(custom) |
TAR (of CEL) |
| Processed data included within Sample table |
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