|
| Status |
Public on May 25, 2022 |
| Title |
Whole larval transcriptional changes due to nlrc3l deficiency in larval zebrafish. |
| Organism |
Danio rerio |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We conducted a whole genome transcriptome analysis to examine significant gene expression changes in whole zebrafish larvae at 4 dpf between nlrc3l st73 mutants compared with their control siblings.
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| |
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| Overall design |
RNAseq dataset from pooled 10-12 whole larvae at 4dpf were used to extract total RNA from nlrc3l st73 heterozyous/wt animals and nlrc3l st73 homozygous mutants that were sorted based on microglia phenotype using neutral red staining.
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| |
|
| Contributor(s) |
Shiau CE |
| Citation(s) |
35577844 |
| |
| Submission date |
Jul 11, 2021 |
| Last update date |
May 25, 2022 |
| Contact name |
Celia E Shiau |
| Organization name |
UNC Chapel Hill
|
| Street address |
4344 Genome Sciences Building
|
| City |
Chapel Hill |
| State/province |
NC |
| ZIP/Postal code |
27599 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL18413 |
Illumina HiSeq 2500 (Danio rerio) |
|
| Samples (4)
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|
| Relations |
| BioProject |
PRJNA745460 |
| SRA |
SRP327857 |
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