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Series GSE17666 Query DataSets for GSE17666
Status Public on Aug 12, 2010
Title Regulatory Role for PC-TP/StarD2 in the Metabolic Response to Peroxisome Proliferator Activated Receptor Alpha (PPARα)
Organism Mus musculus
Experiment type Expression profiling by array
Summary Phosphatidylcholine transfer protein (PC-TP, a.k.a StarD2) is abundantly expressed in liver and is regulated by PPARα. When fed the synthetic PPARα ligand fenofibrate, Pctp-/- mice exhibited altered lipid and glucose homeostasis. Microarray profiling of liver from fenofibrate fed wild type and Pctp-/- mice revealed differential expression of a broad array of metabolic genes, as well as their regulatory transcription factors. Because its expression controlled the transcriptional activities of both PPARα and HNF4α in cell culture, the broader impact of PC-TP on nutrient metabolism is most likely secondary to its role in fatty acid metabolism.
 
Overall design 6 livers collected from PC-TP knockout mice fed a fenobrate-supplemented diet were used as the experimental group. 6 livers collected from wild type mice fed a fenofibrate-supplemented diet were used as the control group. RNA prepared from one liver was used to hybridize one GeneChip, so that there were 6 experimental GeneChips and 6 control GeneChips.
 
Contributor(s) Cohen DE, Kang HW, Kanno K
Citation(s) 20045742
Submission date Aug 14, 2009
Last update date May 04, 2018
Contact name hyewon kang
Organization name Brigham & Women's Hospital
Street address 75 Fransis street
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (1)
GPL8321 [Mouse430A_2] Affymetrix Mouse Genome 430A 2.0 Array
Samples (12)
GSM440922 liver_feno_KO_rep1
GSM440923 liver_feno_KO_rep2
GSM440924 liver_feno_KO_rep3
Relations
BioProject PRJNA118629

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE17666_RAW.tar 24.0 Mb (http)(custom) TAR (of CEL)
GSE17666_filtered_data.txt.gz 48.3 Kb (ftp)(http) TXT
Processed data included within Sample table

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