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GEO accession:
Series GSE175886
Query DataSets for GSE175886
Status
Public on Jun 01, 2021
Title
RNA-Seq of isogenic human iPS cell-derived cardiomyocytes with RBM20 mutations created by genome editing
Organism
Homo sapiens
Experiment type
Expression profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
34732726
Submission date
Jun 01, 2021
Last update date
Dec 02, 2021
Contact name
Nathan Salomonis
E-mail(s)
nathan.salomonis@cchmc.org
Organization name
Cincinnati Children's Hospital
Department
Biomedical Informatics
Lab
Nathan Salomonis
Street address
3333 Burnet Avenue
City
Cincinnati
State/province
OH
ZIP/Postal code
45229
Country
USA
Platforms (2)
GPL16791
Illumina HiSeq 2500 (Homo sapiens)
GPL20301
Illumina HiSeq 4000 (Homo sapiens)
Samples (41)
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More...
GSM3124390
WTC11 RBM20 8-bp deletion Homo replicate 1
GSM3124391
WTC11 RBM20 8-bp deletion Homo replicate 2
GSM3124392
WTC11 RBM20 8-bp deletion Homo replicate 3
GSM3124393
WTC11 RBM20 8-bp deletion Homo replicate 4
GSM3124394
WTC11 RBM20 R636S Het replicate 1
GSM3124395
WTC11 RBM20 R636S Het replicate 2
GSM3124396
WTC11 RBM20 R636S Het replicate 3
GSM3124397
WTC11 RBM20 R636S Het replicate 4
GSM3124398
WTC11 RBM20 R636S Het replicate 5
GSM3124399
WTC11 RBM20 R636S Het replicate 6
GSM3124400
WTC11 RBM20 R636S Homo replicate 1
GSM3124401
WTC11 RBM20 R636S Homo replicate 2
GSM3124402
WTC11 RBM20 R636S Homo replicate 3
GSM3124403
WTC11 WT replicate 1
GSM3124404
WTC11 WT replicate 2
GSM3124405
WTC11 WT replicate 3
GSM3124406
WTC11 WT replicate 4
GSM3124407
WTC11 WT replicate 5
GSM3124408
WTC11 WT replicate 6
GSM3124409
WTC11 WT replicate 7
GSM3124410
WTC11 WT replicate 8
GSM5350776
WTC11 Wild-Type Ribo- replicate 1
GSM5350777
WTC11 Wild-Type Ribo- replicate 2
GSM5350778
WTC11 RBM20 R636S Het Ribo- replicate 1
GSM5350779
WTC11 RBM20 R636S Het Ribo- replicate 2
GSM5350780
WTC11 RBM20 R636S Het Ribo- replicate 3
GSM5350781
WTC11 RBM20 R636S Homo Ribo- replicate 1
GSM5350782
WTC11 RBM20 8-bp deletion Homo Ribo- replicate 1
GSM5350783
WTC11 RBM20 8-bp deletion Homo Ribo- replicate 2
GSM5353720
WTB Wild-Type replicate 1
GSM5353721
WTB Wild-Type replicate 2
GSM5353722
WTB RBM20 R636S Het replicate 1
GSM5353723
WTB RBM20 R636S Het replicate 2
GSM5354304
WTC11 eCLIP input-control wild-type replicate 1
GSM5354305
WTC11 RBM20 eCLIP wild-type replicate 1
GSM5354306
WTC11 eCLIP input-control wild-type replicate 2
GSM5354307
WTC11 RBM20 eCLIP wild-type replicate 2
GSM5354308
WTC11 eCLIP input-control R636S replicate 1
GSM5354309
WTC11 RBM20 eCLIP R636S replicate 1
GSM5354310
WTC11 eCLIP input-control R636S replicate 2
GSM5354311
WTC11 RBM20 eCLIP R636S replicate 2
This SuperSeries is composed of the following SubSeries:
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More...
GSE113947
RNA-Seq of isogenic human iPS cell-derived cardiomyocytes with RBM20 mutations created by genome editing [RNA-Seq]
GSE175885
RNA-Seq of isogenic human iPS cell-derived cardiomyocytes with RBM20 mutations created by genome editing (RiboMinus RNA-Seq)
GSE176045
RNA-Seq of isogenic human iPS cell-derived cardiomyocytes with RBM20 mutations created by genome editing (WTB RNA-Seq)
GSE176060
RNA-Seq of isogenic human iPS cell-derived cardiomyocytes with RBM20 mutations created by genome editing (eCLIP)
Relations
BioProject
PRJNA734252
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
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Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE175886_RAW.tar
280.0 Kb
(http)
(custom)
TAR (of TXT)
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