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Series GSE169158 Query DataSets for GSE169158
Status Public on Apr 16, 2021
Title Host transcriptome response to SARS-CoV2 infection
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary HEK293T stable express hACE2 was infected by SARS-CoV-2 (WA1) and RNA-seq was performed to profile host gene expression in response to SARS-COV-2 infection
 
Overall design Both mock and infection samples were duplicated, infected at MOI=1 for three days
 
Contributor(s) Sun G, Shi Y, Arumugaswami V, Riggs A
Citation(s) 34433867
Submission date Mar 18, 2021
Last update date Aug 27, 2021
Contact name Guihua Sun
E-mail(s) gusun@coh.org
Phone 6262182019
Organization name City of hope
Department Department of Neurodegenerative Diseases
Street address 1500 East Duarte Rd.
City Duarte
State/province CA
ZIP/Postal code 91010
Country USA
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (4)
GSM5179130 HEK293T-hACE2_mock rep1
GSM5179131 HEK293T-hACE2_mock rep2
GSM5179132 HEK293T-hACE2_cov rep1
Relations
BioProject PRJNA715450
SRA SRP311214

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE169158_RAW.tar 10.0 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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