|
| Status |
Public on May 03, 2009 |
| Title |
Transcription profiling of Brassica lines |
| Platform organism |
Brassica |
| Sample organisms |
Brassica napus; Brassica rapa; Brassica oleracea |
| Experiment type |
Expression profiling by array
|
| Summary |
Transcription profiling of Brassica rapa, Brassica oleracea and Brassica napus I and II
The nuclear genomes of the resynthesised B. napus lines should be identical but, as one (B. napus I) involved a cross of B. oleracea onto B. rapa, and the other (B. napus II) involved a cross of B rapa onto B. oleracea, they differ in cytoplasm, and hence contain different chloroplast and mitochondrial genomes.
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| |
|
| Overall design |
Four-condition experiment, comparison of transcription profiles of the genomes. Four biological replicates were used, independently grown and harvested. One replicate per array.
|
| |
|
| Contributor(s) |
Trick M, Cheung F, Drou N, Fraser F, Lebenhofer EK, Hurban P, Magusin A, Town CD, Bancroft I |
| Citation(s) |
19426481 |
| |
| Submission date |
Apr 30, 2009 |
| Last update date |
May 08, 2015 |
| Contact name |
Andreas Magusin |
| E-mail(s) |
andreas.magusin@jic.ac.uk
|
| Organization name |
John Innes Centre
|
| Department |
Crop Genetics
|
| Street address |
Norwich Research Park
|
| City |
Norwich |
| ZIP/Postal code |
NR47UH |
| Country |
United Kingdom |
| |
|
| Platforms (1) |
| GPL8513 |
Agilent-018073 Custom Brassica 60-mer two-color microarray |
|
| Samples (16)
|
|
| Relations |
| BioProject |
PRJNA116915 |
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