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| Status |
Public on Oct 02, 2020 |
| Title |
Single-cell omics analysis reveals functional diversification of hepatocytes during liver regeneration |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
33208554 |
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| Submission date |
Oct 01, 2020 |
| Last update date |
Nov 25, 2020 |
| Contact name |
Anna Mae Diehl |
| Organization name |
Duke University
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| Street address |
Research Drive
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| City |
Durham |
| ZIP/Postal code |
27710 |
| Country |
USA |
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| Platforms (3) |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
| GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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| Samples (20)
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| GSM4812342 |
PHx 48hr rep1 |
| GSM4812343 |
PHx 48hr rep2 |
| GSM4812344 |
PHx 48hr rep3 |
| GSM4812345 |
PHx, 0hr rep1 |
| GSM4812346 |
PHx, 0hr rep2 |
| GSM4812347 |
PHx, 48h rep1 |
| GSM4812348 |
PHx, 48h rep2 |
| GSM4812349 |
PHx, 72h rep1 |
| GSM4812350 |
PHx, 72h rep2 |
| GSM4812351 |
PHx, 96h rep1 |
| GSM4812352 |
PHx, 96h rep2 |
| GSM4812353 |
PHx 0hr_scRNA-seq |
| GSM4812354 |
PHx 48hr_scRNA-seq |
| GSM4812424 |
PHx, 0hr_scATAC |
| GSM4812425 |
PHx, 48hr_scATAC |
| GSM4812426 |
PHx, 72hr_scATAC |
| GSM4812427 |
PHx, 96hr_scATAC |
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| This SuperSeries is composed of the following SubSeries:
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| GSE158864 |
Single-cell omics analysis reveals functional diversification of hepatocytes during liver regeneration [RNA-Seq] |
| GSE158865 |
Single-cell omics analysis reveals functional diversification of hepatocytes during liver regeneration [ATAC-Seq] |
| GSE158866 |
Single-cell omics analysis reveals functional diversification of hepatocytes during liver regeneration [scRNA-Seq] |
| GSE158873 |
Single-cell omics analysis reveals functional diversification of hepatocytes during liver regeneration [scATAC-Seq] |
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| Relations |
| BioProject |
PRJNA666797 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE158874_RAW.tar |
423.4 Mb |
(http)(custom) |
TAR (of BED, MTX, NARROWPEAK, TSV, TXT) |
SRA Run Selector |
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