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GEO help: Mouse over screen elements for information. |
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Status |
Public on Jun 11, 2020 |
Title |
Extensive transcriptional and chromatin changes underlie astrocyte maturation in vivo and in culture |
Organism |
Mus musculus |
Experiment type |
Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing
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Summary |
This SuperSeries is composed of the SubSeries listed below.
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Overall design |
Refer to individual Series
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Web link |
https://www.biorxiv.org/content/10.1101/2020.04.28.066043v2
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Citation(s) |
34267208 |
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Submission date |
Jun 10, 2020 |
Last update date |
Jul 27, 2021 |
Contact name |
Michael Lattke |
E-mail(s) |
michael.lattke@yahoo.de, m.lattke@imperial.ac.uk
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Organization name |
Imperial College London
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Department |
Brain Sciences
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Street address |
Hammersmith Hospital Campus, Du Cane Road
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City |
London |
ZIP/Postal code |
W12 0NN |
Country |
United Kingdom |
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Platforms (1) |
GPL21103 |
Illumina HiSeq 4000 (Mus musculus) |
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Samples (116)
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GSM4609437 |
Astr in vitro, prep X9 |
GSM4609438 |
Astr in vitro, prep X6 |
GSM4609439 |
Astr in vitro, prep X8 |
GSM4609440 |
Cortical Astr, P4, prep 1, run 1 |
GSM4609441 |
Cortical Astr, P4, prep 1, run 2 |
GSM4609442 |
Cortical Astr, P4, prep 2, run 1 |
GSM4609443 |
Cortical Astr, P4, prep 2, run 2 |
GSM4609444 |
Cortical Astr, P4, prep 3, run 1 |
GSM4609445 |
Cortical Astr, P4, prep 3, run 2 |
GSM4609446 |
Cortical Astr, 2m, prep 1, run 1 |
GSM4609447 |
Cortical Astr, 2m, prep 1, run 2 |
GSM4609448 |
Cortical Astr, 2m, prep 2, run 1 |
GSM4609449 |
Cortical Astr, 2m, prep 2, run 2 |
GSM4609450 |
Cortical Astr, 2m, prep 3, run 1 |
GSM4609451 |
Cortical Astr, 2m, prep 3, run 2 |
GSM4609452 |
Cortical Astr, 2m, prep 4, run 1 |
GSM4609453 |
Cortical Astr, 2m, prep 4, run 2 |
GSM4609454 |
Astr in vitro, prep X6, BMP 7d, basal 7d |
GSM4609455 |
Astr in vitro, prep X8, BMP 7d, basal 7d |
GSM4609456 |
Astr in vitro, prep X9, BMP 7d, basal 7d |
GSM4609457 |
Astr in vitro, prep X6, BMP 7d, FGF2 7d |
GSM4609458 |
Astr in vitro, prep X8, BMP 7d, FGF2 7d |
GSM4609459 |
Astr in vitro, prep X9, BMP 7d, FGF2 7d |
GSM4609460 |
Astr in vitro, prep X6, 3D, BMP 7d, basal 7d |
GSM4609461 |
Astr in vitro, prep X8, 3D, BMP 7d, basal 7d |
GSM4609462 |
Astr in vitro, prep X9, 3D, BMP 7d, basal 7d |
GSM4609463 |
Astr in vitro, prep X6, 3D, BMP 7d, FGF2 7d |
GSM4609464 |
Astr in vitro, prep X8, 3D, BMP 7d, FGF2 7d |
GSM4609465 |
Astr in vitro, prep X9, 3D, BMP 7d, FGF2 7d |
GSM4609466 |
Astr in vitro, prep X6, EGFP, run 1 |
GSM4609467 |
Astr in vitro, prep X6, EGFP, run 2 |
GSM4609468 |
Astr in vitro, prep X8, EGFP, run 1 |
GSM4609469 |
Astr in vitro, prep X8, EGFP, run 2 |
GSM4609470 |
Astr in vitro, prep X9, EGFP, run 1 |
GSM4609471 |
Astr in vitro, prep X9, EGFP, run 2 |
GSM4609472 |
Astr in vitro, prep X6, EGFP, exp2 |
GSM4609473 |
Astr in vitro, prep X8, EGFP, exp2 |
GSM4609474 |
Astr in vitro, prep X9, EGFP, exp2 |
GSM4609475 |
Astr in vitro, prep X6, Rorb |
GSM4609476 |
Astr in vitro, prep X8, Rorb |
GSM4609477 |
Astr in vitro, prep X9, Rorb |
GSM4609478 |
Astr in vitro, prep X6, Dbx2, run 1 |
GSM4609479 |
Astr in vitro, prep X6, Dbx2, run 2 |
GSM4609480 |
Astr in vitro, prep X8, Dbx2, run 1 |
GSM4609481 |
Astr in vitro, prep X8, Dbx2, run 2 |
GSM4609482 |
Astr in vitro, prep X9, Dbx2, run 1 |
GSM4609483 |
Astr in vitro, prep X9, Dbx2, run 2 |
GSM4609484 |
Astr in vitro, prep X6, Lhx2 |
GSM4609485 |
Astr in vitro, prep X8, Lhx2 |
GSM4609486 |
Astr in vitro, prep X9, Lhx2 |
GSM4609491 |
NSC in vitro, prep X6 [RNA-Seq] |
GSM4609492 |
NSC in vitro, prep X8 [RNA-Seq] |
GSM4609493 |
NSC in vitro, prep X9 [RNA-Seq] |
GSM4609494 |
Astr in vitro, prep X6 [RNA-Seq] |
GSM4609495 |
Astr in vitro, prep X8 [RNA-Seq] |
GSM4609496 |
Astr in vitro, prep X9 [RNA-Seq] |
GSM4609497 |
Cortical Astr, P4, prep 1 [RNA-Seq] |
GSM4609498 |
Cortical Astr, P4, prep 2 [RNA-Seq] |
GSM4609499 |
Cortical Astr, P4, prep 3 [RNA-Seq] |
GSM4609500 |
Cortical Astr, 2m, prep 1 [RNA-Seq] |
GSM4609501 |
Cortical Astr, 2m, prep 2 [RNA-Seq] |
GSM4609502 |
Cortical Astr, 2m, prep 3 [RNA-Seq] |
GSM4609503 |
Astr in vitro, prep X6, EGFP [RNA-Seq] |
GSM4609504 |
Astr in vitro, prep X8, EGFP [RNA-Seq] |
GSM4609505 |
Astr in vitro, prep X9, EGFP [RNA-Seq] |
GSM4609506 |
Astr in vitro, prep X6, EGFP (2) [RNA-Seq] |
GSM4609507 |
Astr in vitro, prep X8, EGFP (2) [RNA-Seq] |
GSM4609508 |
Astr in vitro, prep X9, EGFP (2) [RNA-Seq] |
GSM4609509 |
Astr in vitro, prep X6, Rorb [RNA-Seq] |
GSM4609510 |
Astr in vitro, prep X8, Rorb [RNA-Seq] |
GSM4609511 |
Astr in vitro, prep X9, Rorb [RNA-Seq] |
GSM4609512 |
Astr in vitro, prep X6, Dbx2 [RNA-Seq] |
GSM4609513 |
Astr in vitro, prep X8, Dbx2 [RNA-Seq] |
GSM4609514 |
Astr in vitro, prep X9, Dbx2 [RNA-Seq] |
GSM4609515 |
Astr in vitro, prep X6, Lhx2 [RNA-Seq] |
GSM4609516 |
Astr in vitro, prep X8, Lhx2 [RNA-Seq] |
GSM4609517 |
Astr in vitro, prep X9, Lhx2 [RNA-Seq] |
GSM4609518 |
Astr in vitro, prep X6, Fezf2 [RNA-Seq] |
GSM4609519 |
Astr in vitro, prep X8, Fezf2 [RNA-Seq] |
GSM4609520 |
Astr in vitro, prep X9, Fezf2 [RNA-Seq] |
GSM4609521 |
Astr in vitro, prep X6, Rorb and Fezf2 [RNA-Seq] |
GSM4609522 |
Astr in vitro, prep X8, Rorb and Fezf2 [RNA-Seq] |
GSM4609523 |
Astr in vitro, prep X9, Rorb and Fezf2 [RNA-Seq] |
GSM4609524 |
Astr in vitro, prep X6, BMP 7d, basal 7d [RNA-Seq] |
GSM4609525 |
Astr in vitro, prep X8, BMP 7d, basal 7d [RNA-Seq] |
GSM4609526 |
Astr in vitro, prep X9, BMP 7d, basal 7d [RNA-Seq] |
GSM4609527 |
Astr in vitro, prep X6, BMP 7d, FGF2 7d [RNA-Seq] |
GSM4609528 |
Astr in vitro, prep X8, BMP 7d, FGF2 7d [RNA-Seq] |
GSM4609529 |
Astr in vitro, prep X9, BMP 7d, FGF2 7d [RNA-Seq] |
GSM4609530 |
Astr in vitro, prep X6, 3D, BMP 7d, basal 7d [RNA-Seq] |
GSM4609531 |
Astr in vitro, prep X8, 3D, BMP 7d, basal 7d [RNA-Seq] |
GSM4609532 |
Astr in vitro, prep X9, 3D, BMP 7d, basal 7d [RNA-Seq] |
GSM4609533 |
Astr in vitro, prep X6, 3D, BMP 7d, FGF2 7d [RNA-Seq] |
GSM4609534 |
Astr in vitro, prep X8, 3D, BMP 7d, FGF2 7d [RNA-Seq] |
GSM4609535 |
Astr in vitro, prep X9, 3D, BMP 7d, FGF2 7d [RNA-Seq] |
GSM4609536 |
Striatum 3m, repl 1, run 1 |
GSM4609537 |
Striatum 3m, repl 1, run 2 |
GSM4609538 |
Striatum 3m, repl 1, run 3 |
GSM4609539 |
Striatum 3m, repl 1, run 4 |
GSM4609540 |
Striatum P7, run 1 |
GSM4609541 |
Striatum P7, run 2 |
GSM4609542 |
Striatum P7, run 3 |
GSM4609543 |
Striatum P7, run 4 |
GSM4609544 |
Striatum 3m, repl 2, run 1 |
GSM4609545 |
Striatum 3m, repl 2, run 2 |
GSM4609546 |
Striatum P3, run 1 |
GSM4609547 |
Striatum P3, run 2 |
GSM5114097 |
Striatum P3, repl 1 |
GSM5114098 |
Striatum 3m, repl 1 |
GSM5114099 |
Striatum P3, repl 2 |
GSM5114100 |
Striatum 3m, repl 2 |
GSM5114101 |
Striatum P3, repl 3 |
GSM5114102 |
Striatum 3m, repl 3 |
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This SuperSeries is composed of the following SubSeries:
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GSE152219 |
Chromatin accessibility changes during astrocyte maturation in vivo and in culture |
GSE152221 |
Transcriptional changes during astrocyte maturation in vivo and in culture |
GSE152222 |
Transcriptional changes during astrocyte maturation in vivo at single cell resolution |
GSE167864 |
Transcriptional changes during astrocyte maturation in vivo at single cell resolution II |
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Relations |
BioProject |
PRJNA638651 |
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