NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE150991 Query DataSets for GSE150991
Status Public on May 22, 2020
Title Resistance to PD1 blockade in the absence of metalloprotease-mediated LAG3 shedding
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Mechanisms of resistance to cancer immunotherapy remain poorly understood. Lymphocyte Activation Gene-3 (LAG3) signaling is regulated by A Disintegrin And Metalloprotease-10 (ADAM10) and ADAM17-mediated cell surface shedding. We developed and utilized mutant mice expressing a metalloprotease-resistance version of LAG3 that can be selectively expressed in T cell subsets. We sorted live T cells from tumors of mice bearing MC38 tumors following 3 treatments with either anti-PD1 or IgG control, and performed single-cell RNAseq using 10X 3' v2 reagents.
 
Overall design Investigation of transcription profiles of T cells from tumors of wild-type or mutant M38 bearing mice folllowing treatment with anti-PD1 or isotype
 
Contributor(s) Andrews LP, Cillo AR, Vignali DA
Citation(s) 32680952
NIH grant(s)
Grant ID Grant title Affiliation Name
P01 AI108545 Synergies among inhibitory receptors in tolerance, cancer & antiviral immunity UNIVERSITY OF PITTSBURGH AT PITTSBURGH Dario AA Vignali
R01 AI144422 Structure, Function and Mechanistic Analysis of LAG3 UNIVERSITY OF PITTSBURGH AT PITTSBURGH Dario AA Vignali
R01 EB022433 Lymph node-targeted molecular vaccines MASSACHUSETTS INSTITUTE OF TECHNOLOGY Darrell J Irvine
Submission date May 21, 2020
Last update date Aug 21, 2020
Contact name Anthony Richard Cillo
E-mail(s) arc85@pitt.edu
Organization name University of Pittsburgh
Department Immunology
Street address The Assembly, Room 4070C Bay 10, 5051 Centre Ave
City Pittsburgh
State/province PA
ZIP/Postal code 15213
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (4)
GSM4563424 wild_type_isotype_tx
GSM4563425 lag3nc_isotype_tx
GSM4563426 wild_type_anti_pd1_tx
Relations
BioProject PRJNA634347
SRA SRP262640

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE150991_RAW.tar 48.4 Mb (http)(custom) TAR (of TAR)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap