|
| Status |
Public on May 28, 2020 |
| Title |
Global investigation by TAILseq of mRNA 3' ends in Arabidopsis thaliana flowers |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
To estimate mRNA uridylation levels at a transcriptome-wide level, TAIL-seq libraries were generated for three biological replicates of Col-0 plants.
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| |
|
| Overall design |
TAILseq method (Chang et al. 2014, https://doi.org/10.1016/j.molcel.2014.02.007) was used to measure poly(A) tail sizes and analyze uridylation levels.
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| |
|
| Contributor(s) |
de Almeida C, Zuber H, Gagliardi D |
| Citation(s) |
33637717 |
|
Molecular connection between the TUTase URT1 and decapping activators. Hélène Scheer, Caroline de Almeida, Emilie Ferrier, Laure Poirier, David Pflieger, François M Sement, Sandrine Koechler, Christina Piermaria, Johana Chicher, Lauriane Kuhn, Philippe Hammann, Hélène Zuber, Dominique Gagliardi. bioRxiv 2020.05.26.114322.
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| |
| Submission date |
Apr 09, 2020 |
| Last update date |
Mar 10, 2021 |
| Contact name |
Dominique Gagliardi |
| E-mail(s) |
dominique.gagliardi@ibmp-cnrs.unistra.fr
|
| Organization name |
CNRS
|
| Department |
IBMP
|
| Street address |
12, rue du General Zimmer
|
| City |
Strasbourg |
| ZIP/Postal code |
67084 |
| Country |
France |
| |
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| Platforms (1) |
| GPL17970 |
Illumina MiSeq (Arabidopsis thaliana) |
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| Samples (3) |
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| This SubSeries is part of SuperSeries: |
| GSE148449 |
Molecular connection between the TUTase URT1 and decapping activators |
|
| Relations |
| BioProject |
PRJNA624159 |
| SRA |
SRP255907 |
