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| Status |
Public on Jun 01, 2020 |
| Title |
Transcriptome of the panx1a-knock out zebrafish |
| Organism |
Danio rerio |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Pannexin 1 (Panx1) forms ATP-permeable membrane channels that play roles in the nervous system. The analysis of roles in both standard and pathological conditions benefits from a model organism with rapid development and early onset of behaviors. Such a model was developed by ablating the zebrafish panx1a gene using TALEN technology. Here, RNA-seq data of 6dpf wild type and knock-out zebrafish is reported which have been generated by gene editing of exon 4 of the panx1a gene.
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| |
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| Overall design |
Paired end sequencing of
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| |
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| Contributor(s) |
Zoidl GR, Safarian N |
| Citation(s) |
32533080 |
| |
| Submission date |
Mar 16, 2020 |
| Last update date |
Aug 31, 2020 |
| Contact name |
Georg Zoidl |
| E-mail(s) |
gzoidl@yorku.ca
|
| Phone |
1-416-736-2100
|
| Organization name |
York University
|
| Department |
Biology
|
| Street address |
4700 Keele Street
|
| City |
Toronto |
| State/province |
Ontario |
| ZIP/Postal code |
M3J1P3 |
| Country |
Canada |
| |
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| Platforms (1) |
| GPL18413 |
Illumina HiSeq 2500 (Danio rerio) |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA612878 |
| SRA |
SRP252996 |
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