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Series GSE13389 Query DataSets for GSE13389
Status Public on Dec 01, 2008
Title hr-Transcriptomic analysis of the localized acquired resistance (LAR) phenomenon in Arabidopsis thaliana
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary tri38-lar - hr - Analyse the transcriptome of Arabidopsis thaliana plants developing localized acquired resistance (LAR) and a hypersensitive response (HR). The goal is to identify genes inducing LAR and/or HR. Here, we want to analyse the transcriptome of Arabidopsis thaliana developing HR. To achieve this, we used Col0 leaf tissues developing an HR reaction after inoculation of the avirulent strain of PstDC3000 carrying the gene avrRpm1.

Keywords: normal vs disease comparison
 
Overall design 1 dye-swap - CATMA arrays
Web link http://urgv.evry.inra.fr/cgi-bin/projects/CATdb/consult_expce.pl?experiment_id=261
 
Contributor(s) Bitton F, Renou JP, KAUFFMANN S, Martin-Magniette ML
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Submission date Oct 29, 2008
Last update date May 03, 2012
Contact name Frederique Bitton
E-mail(s) bitton@evry.inra.fr
URL http://www.evry.inra.fr
Organization name INRA
Lab URGV
Street address 2 rue Gaston Cremieux
City Evry
ZIP/Postal code 91000
Country France
 
Platforms (1)
GPL4346 URGV Arabidopsis thaliana 25K CATMA_v2.2
Samples (2)
GSM338228 13192071 - HR-6h-T vs HR-6h-C
GSM338229 13192072 - HR-6h-C vs HR-6h-T
Relations
BioProject PRJNA109815

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE13389_RAW.tar 3.7 Mb (http)(custom) TAR (of GPR)
Processed data included within Sample table

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