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Series GSE131700 Query DataSets for GSE131700
Status Public on Aug 02, 2021
Title Graft junction transcriptome between tomato and pepper over time
Organisms Capsicum annuum; Solanum lycopersicum
Experiment type Expression profiling by high throughput sequencing
Summary We report transcripts from tomato:tomato and pepper:pepper self-grafts, and tomato:pepper and pepper:tomato hetergrafts over 4 time points: 24 hours after grafting, 3 days after grafting, 5 day after grafting, and 2 weeks after grafting
Examination of 4 graft combinations over 4 time points
 
Overall design Margaret, H, Frank
 
Contributor(s) Thomas HR
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date May 23, 2019
Last update date Aug 03, 2021
Contact name Blake C. Meyers
E-mail(s) bmeyers@danforthcenter.org
Phone 314-587-1422
Organization name Donald Danforth Plant Science Center
Lab Meyers lab
Street address 975 N Warson Road
City St. Louis
State/province MO
ZIP/Postal code 63132
Country USA
 
Platforms (3)
GPL16195 Illumina HiSeq 2000 (Capsicum annuum)
GPL16345 Illumina HiSeq 2000 (Solanum lycopersicum)
GPL26701 Illumina HiSeq 2000 (Capsicum annuum; Solanum lycopersicum)
Samples (58)
GSM3814170 Sample 1
GSM3814171 Sample 2
GSM3814172 Sample 3
Relations
BioProject PRJNA544493
SRA SRP199341

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE131700_RAW.tar 9.5 Gb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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