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Series GSE128408 Query DataSets for GSE128408
Status Public on May 22, 2019
Title In vivo gene signature of TLR3KO mice stimulated by ethanol (EtOH) or all trans retinoic acid (atRA) treatment
Organism Mus musculus
Experiment type Expression profiling by array
Summary How developmental programs reactivate in regeneration is a fundamental question in biology. We addressed this question through the study of Wound Induced Hair follicle Neogenesis (WIHN), an adult organogenesis model where stem cells regenerate entirely new hair follicles de novo following deep wounding. The exact mechanism is uncertain. Here we show that self-noncoding dsRNA activates the anti-viral receptor TLR3 to induce intrinsic retinoic acid (RA) synthesis in a gradient that predicts new hair follicle formation after wounding in mice. Additionally, in humans, rejuvenation lasers induce gene expression signatures for dsRNA and RA, with measurable increases in intrinsic RA synthesis. These results demonstrate a novel stimulus for retinoic acid synthesis by non-coding dsRNA, relevant to their broad functions in development and immunity.
The goal of this experiment is to investigate the profile of gene expression rescued by atRA in TLR3KO mice.
 
Overall design Two TLR3KO mice at telogen stage were wounded on back skin with 1.2 cm2 size. Next day (wound day 1-WD1), 30 ul of EtOH or 0.1 ug/30 ul of atRA was locally treated onto wounded skin of one TLR3KO mouse.
 
Contributor(s) Garza L, Chen R
Citation(s) 31243280
Submission date Mar 16, 2019
Last update date Jul 09, 2019
Contact name Luis Andres Garza
E-mail(s) LAG@jhmi.edu
Phone 410-955-8662
Organization name Johns Hopkins School of Medicine
Department Dermatology
Lab Garza lab
Street address 1550 Orleans St. Suite 204 CRBII Koch
City Baltimore
State/province MD
ZIP/Postal code 21287
Country USA
 
Platforms (1)
GPL23038 [Clariom_S_Mouse] Affymetrix Clariom S Assay, Mouse (Includes Pico Assay)
Samples (2)
GSM3673794 Ethanol (EtOH) treatment
GSM3673795 All trans retinoic acid (atRA) treatment
This SubSeries is part of SuperSeries:
GSE128868 Noncoding dsRNA induces retinoic acid synthesis to stimulate hair follicle regeneration via TLR3
Relations
BioProject PRJNA527461

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE128408_RAW.tar 2.1 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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