|
| Status |
Public on Jan 27, 2021 |
| Title |
The chromosomal protein SMCHD1 regulates DNA methylation by antagonizing TET proteins |
| Organism |
Mus musculus |
| Experiment type |
Methylation profiling by high throughput sequencing
Expression profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
33523915 |
|
https://doi.org/10.1126/sciadv.abb9149
|
| |
| Submission date |
Feb 12, 2019 |
| Last update date |
Feb 08, 2021 |
| Contact name |
Gerd P Pfeifer |
| E-mail(s) |
gerd.pfeifer@vai.org
|
| Organization name |
Van Andel Research Institute
|
| Department |
Center for Epigenetics
|
| Street address |
333 Bostwick Ave NE
|
| City |
Grand Rapids |
| State/province |
MI |
| ZIP/Postal code |
49503 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
| GPL21273 |
HiSeq X Ten (Mus musculus) |
|
| Samples (30)
|
|
| This SuperSeries is composed of the following SubSeries: |
| GSE126466 |
WGBS of WT and Smchd1-KO ES cells |
| GSE126467 |
RNAseq of Wildtype, Smchd1 KO, Dux KO, Double KO, Tet-TKO and quadurple KO ES cells |
|
| Relations |
| BioProject |
PRJNA521982 |
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