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Series GSE126468 Query DataSets for GSE126468
Status Public on Jan 27, 2021
Title The chromosomal protein SMCHD1 regulates DNA methylation by antagonizing TET proteins
Organism Mus musculus
Experiment type Methylation profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
Overall design Refer to individual Series
Citation(s) 33523915
Submission date Feb 12, 2019
Last update date Feb 08, 2021
Contact name Gerd P Pfeifer
Organization name Van Andel Research Institute
Department Center for Epigenetics
Street address 333 Bostwick Ave NE
City Grand Rapids
State/province MI
ZIP/Postal code 49503
Country USA
Platforms (2)
GPL19057 Illumina NextSeq 500 (Mus musculus)
GPL21273 HiSeq X Ten (Mus musculus)
Samples (30)
GSM3602177 WGBS_WT1
GSM3602178 WGBS_WT2
GSM3602179 WGBS_WT3
This SuperSeries is composed of the following SubSeries:
GSE126466 WGBS of WT and Smchd1-KO ES cells
GSE126467 RNAseq of Wildtype, Smchd1 KO, Dux KO, Double KO, Tet-TKO and quadurple KO ES cells
BioProject PRJNA521982

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE126468_RAW.tar 1.5 Gb (http)(custom) TAR (of COV)
SRA Run SelectorHelp

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