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Series GSE125601 Query DataSets for GSE125601
Status Public on Dec 10, 2019
Title Small RNA-mediated transgenerational silencing of histone genes impairs fertility in piRNA mutants
Organism Caenorhabditis elegans
Experiment type Expression profiling by high throughput sequencing
Other
Non-coding RNA profiling by high throughput sequencing
Summary PIWI-interacting RNAs (piRNAs) promote fertility in many animals. Yet, whether this is due to their conserved role in repressing repetitive elements (REs) remains unclear. Here, we show that the progressive loss of fertility in Caenorhabditis elegans lacking piRNAs is not caused by derepression of REs or other piRNA targets, but rather mediated by the epigenetic silencing of all the replicative histone genes. In the absence of piRNAs, downstream components of the piRNA pathway relocalize from germ granules and piRNA targets to histone mRNAs to synthesize antisense small RNAs (sRNAs) and induce transgenerational silencing. Removal of the downstream components of the piRNA pathway restores histone mRNA expression and fertility in piRNA mutants, and the inheritance of histone sRNAs in wild-type worms adversely affects their fertility for multiple generations. We conclude that the sRNA-mediated silencing of histone genes impairs fertility of piRNA mutants and may serve to maintain piRNAs across evolution.
 
Overall design Refer to individual Series
 
Citation(s) 32015436
Submission date Jan 24, 2019
Last update date Feb 28, 2020
Contact name Germano Cecere
E-mail(s) germano.cecere@pasteur.fr
Phone 0033140613225
Organization name Institut Pasteur
Department Development and stem cell biology
Lab Mechanisms of Epigenetic Inheritance
Street address Institut Pasteur, 28 Rue Du Docteur Roux, Batiment Monod, 4eme Etage
City Paris
ZIP/Postal code 75724
Country France
 
Platforms (2)
GPL19757 Illumina NextSeq 500 (Caenorhabditis elegans)
GPL26094 Illumina MiniSeq (Caenorhabditis elegans)
Samples (51)
GSM3577995 N2_rep1_GRO-seq
GSM3577996 N2_rep2_GRO-seq
GSM3577997 prg-1_n4357_rep1_GRO-seq
This SuperSeries is composed of the following SubSeries:
GSE125597 Small RNA-mediated transgenerational silencing of histone genes impairs fertility in piRNA mutants (GRO-Seq)
GSE125598 Small RNA-mediated transgenerational silencing of histone genes impairs fertility in piRNA mutants (sRNA-Seq IP)
GSE125599 Small RNA-mediated transgenerational silencing of histone genes impairs fertility in piRNA mutants (RNA-Seq)
Relations
BioProject PRJNA516897

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE125601_RAW.tar 717.0 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp

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