|
| Status |
Public on Aug 12, 2008 |
| Title |
Stage III serous ovarian adenocarcinomas |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
|
| Summary |
The clinical outcome for patients with ovarian cancer is difficult to predict. However, the use of biomarkers as additional prognostic factors may improve the outcome for these patients. In order to find novel candidate biomarkers, differences in gene expressions were analyzed in 54 stage III serous ovarian adenocarcinomas with oligonucleotide microarrays containing 27,000 unique probes. The microarray data was verified with quantitative real-time polymerase chain reaction for the genes TACC1, MUC5B and PRAME. With a hierarchical cluster analysis we detected a sub-group including 60% of the survivors. The gene expressions in tumours from patients in this sub-group of survivors were compared to the remaining tumours, and 204 genes were found to be differently expressed. We conclude that the sub-group of survivors might represent patients with favourable tumour biology and sensitivity to treatment. A selection of the 204 genes might be used as a predictive model to distinguish patients within and outside of this group. Alternative chemotherapy strategies could then be offered as first-line treatment, which could improve the clinical outcome for these patients.
Keywords: Comparison between groups of samples
|
| |
|
| Overall design |
20 fresh frozen tumors from 5 year survivors were compared to 34 tumors from deceased patients in order to find genes where the expression differed between the two groups
|
| |
|
| Contributor(s) |
Partheen K |
| Citation(s) |
16996261 |
| |
| Submission date |
Aug 12, 2008 |
| Last update date |
Mar 20, 2012 |
| Contact name |
Karolina Partheen |
| E-mail(s) |
karolina.partheen@gu.se
|
| Phone |
+46+31 342 78 55
|
| Fax |
+46 +31 41 72 05
|
| Organization name |
University of Gothenburg
|
| Department |
department of Oncology
|
| Street address |
Blå Stråket 2
|
| City |
Gothenburg |
| ZIP/Postal code |
413 45 |
| Country |
Sweden |
| |
|
| Platforms (1) |
|
| Samples (54)
|
|
| Relations |
| BioProject |
PRJNA113113 |
Less...
More...