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Status
Public on Sep 22, 2007
Title
SWEGENE H_v2.1.1_27k
Technology type
spotted oligonucleotide
Distribution
non-commercial
Organism
Homo sapiens Manufacturer
Swegene DNA Microarray Resource Centre
Manufacture protocol
Arrays were produced by the Swegene DNA micro array resource center at Lund University by using probes from Operon. Probes were recovered in Corning Universal Spotting Solution and printed on amino-silane-coated glass slides (UltraGAPS from Corning) using a MicroGrid2 robot (BioRobotics).
Support
glass
Coating
aminosilane
Web link
http://swegene.onk.lu.se Contributor(s)
Borg A Submission date
Sep 18, 2007
Last update date
Sep 01, 2010
Contact name
Johan Staaf
Organization name
SCIBLU - Swegene Centre for Integrative Biology at Lund University
Street address
Medicon Village
City
Lund
ZIP/Postal code
SE-223 81
Country
Sweden
Samples (101)
GSM234892 , GSM234893 , GSM234894 , GSM234895 , GSM234896 , GSM234897
GSM234898 ,
GSM234899 ,
GSM234900 ,
GSM234901 ,
GSM272841 ,
GSM272842 ,
GSM272843 ,
GSM272844 ,
GSM272845 ,
GSM311938 ,
GSM311939 ,
GSM311940 ,
GSM311941 ,
GSM311942 ,
GSM311943 ,
GSM311944 ,
GSM311945 ,
GSM311946 ,
GSM311947 ,
GSM311948 ,
GSM311949 ,
GSM311950 ,
GSM311951 ,
GSM311952 ,
GSM311953 ,
GSM311954 ,
GSM311955 ,
GSM311956 ,
GSM311957 ,
GSM311958 ,
GSM311959 ,
GSM311960 ,
GSM311961 ,
GSM311962 ,
GSM311963 ,
GSM311964 ,
GSM311965 ,
GSM311966 ,
GSM311967 ,
GSM311968 ,
GSM311969 ,
GSM311970 ,
GSM311971 ,
GSM311972 ,
GSM311973 ,
GSM311974 ,
GSM311975 ,
GSM311976 ,
GSM311977 ,
GSM311978 ,
GSM311979 ,
GSM311980 ,
GSM311981 ,
GSM311982 ,
GSM311983 ,
GSM311984 ,
GSM311985 ,
GSM311986 ,
GSM311987 ,
GSM311988 ,
GSM311989 ,
GSM311990 ,
GSM311991 ,
GSM401461 ,
GSM401462 ,
GSM401463 ,
GSM401464 ,
GSM401465 ,
GSM401466 ,
GSM401467 ,
GSM401468 ,
GSM401469 ,
GSM401470 ,
GSM401471 ,
GSM401472 ,
GSM401473 ,
GSM401474 ,
GSM401475 ,
GSM401476 ,
GSM401477 ,
GSM401478 ,
GSM426051 ,
GSM426052 ,
GSM426053 ,
GSM426054 ,
GSM666014 ,
GSM666015 ,
GSM666016 ,
GSM666017 ,
GSM666018 ,
GSM666019 ,
GSM666020 ,
GSM666021 ,
GSM666022 ,
GSM666023 Series (6)
GSE9252 Gene Expression Analysis of Human Endometrial Endothelial Cells Exposed to o,p'-DDT
GSE10802 Gene Expression Analysis of Human Endometrial Endothelial Cells Exposed to Bisphenol A
GSE12418 Stage III serous ovarian adenocarcinomas
GSE16042 Retroviral transduction of CD34+ cells with P190 and P210 BCR/ABL1 fusion genes
GSE17031 Tasquinimod, a Quinoline-3-Carboxamide Anti-Angiogenic Agent, treated Prostate Cancer Cell Line in-vivo and in-vitro
GSE27040 Dermatan sulfate is involved in the tumorigenic properties of Esophagus Squamous Cell Carcinoma
Data table header descriptions ID CLONEID SPOT_ID_DESCRIPTION short description for SPOT_ID
ReporterID Reporter ID for spot, e.g., either CLONE_ID or SPOT_ID or an internal ID for the spot probe
OligoSet_version oligo set from which annotations are derived
OligoSet_geneSymbol Target gene symbol according to oligo probe provider
OligoSet_description Description according to oligo probe provider
OligoSet_Gbaccession Target GB accession(s) according to oligo probe provider
GB_LIST Target RefSeq(s) according to oligo probe provider
OligoSet_geneId Target Ensembl gene(s) according to oligo probe provider
OligoSet_transcriptId Target Ensembl transcript(s) according to oligo probe provider
ARRAY_BLOCK Array block number, i.e. a number from 1 to 48
BLOCK_COLUMN Column within array block
BLOCK_ROW Row within array block
ORF GenBank Gene
SPOT_ID Identifier for spots that do not contain Operon oligo probes
Data table ID CLONEID SPOT_ID_DESCRIPTION ReporterID OligoSet_version OligoSet_geneSymbol OligoSet_description OligoSet_Gbaccession GB_LIST OligoSet_geneId OligoSet_transcriptId ARRAY_BLOCK BLOCK_COLUMN BLOCK_ROW ORF SPOT_ID 1
H200021335
H200021335
V2.1.3
NM_001101 1
1
1
2
H200021335
H200021335
V2.1.3
NM_001101 1
2
1
3
empty spot coordinate
empty
1
3
1
--empty
4
empty spot coordinate
empty
1
4
1
--empty
5
empty spot coordinate
empty
1
5
1
--empty
6
empty spot coordinate
empty
1
6
1
--empty
7
empty spot coordinate
empty
1
7
1
--empty
8
empty spot coordinate
empty
1
8
1
--empty
9
Control_SS-DNA SS-DNA 100ng/ul in Corning UniversalSpottingSolution
Control_SS-DNA
1
9
1
--Control_SS-DNA
10
empty spot coordinate
empty
1
10
1
--empty
11
Corning UniversalSpottingSolution - Negative Control
UniversalSpottingSolution
1
11
1
--UniversalSpottingSolution
12
empty spot coordinate
empty
1
12
1
--empty
13
Corning UniversalSpottingSolution - Negative Control
UniversalSpottingSolution
1
13
1
--UniversalSpottingSolution
14
empty spot coordinate
empty
1
14
1
--empty
15
Corning UniversalSpottingSolution - Negative Control
UniversalSpottingSolution
1
15
1
--UniversalSpottingSolution
16
empty spot coordinate
empty
1
16
1
--empty
17
Corning UniversalSpottingSolution - Negative Control
UniversalSpottingSolution
1
17
1
--UniversalSpottingSolution
18
empty spot coordinate
empty
1
18
1
--empty
19
Corning UniversalSpottingSolution - Negative Control
UniversalSpottingSolution
1
19
1
--UniversalSpottingSolution
20
empty spot coordinate
empty
1
20
1
--empty
30000 5191 Kbytes .Supplementary data files not provided
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