NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE12251 Query DataSets for GSE12251
Status Public on Aug 25, 2009
Title A Predictive Response Signature to Infliximab Treatment in Ulcerative Colitis
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Infliximab, an anti-TNFa monoclonal antibody, is an effective treatment for ulcerative colitis (UC) inducing over 60% of patients to respond to treatment. Consequently, about 40% of patients do not respond. This study analyzed mucosal gene expression from patients enrolled in ACT1 to provide a predictive response signature for infliximab treatment.

Keywords: predictive response signature
 
Overall design Twenty-two patients underwent colonoscopy with biopsy before infliximab treatment. Response to infliximab was defined as endoscopic and histologic healing at week 8 (P2, 5, 9, 10, 14, 15, 16, 17, 24, 27, 36, and 45 as responders; P3, 12, 13, 19, 28, 29, 32, 33, 34, and 47 as non-responders). Messenger RNA was isolated from pre-infliximab biopsies, labeled and hybridized to Affymetrix HGU133Plus_2.0 Array. The predictive response signature was verified by an independent data set.
 
Contributor(s) Li K, Baribaud F, Toedter G, Ma K, Song X, Marano C
Citation(s) 19700435
Submission date Jul 25, 2008
Last update date Mar 25, 2019
Contact name K Li
E-mail(s) kli@its.jnj.com
Organization name Janssen R&D
Street address 1400 McKean Road
City Spring House
State/province PA
ZIP/Postal code 19477
Country USA
 
Platforms (1)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Samples (23)
GSM307886 P2/10mg/kg/W0
GSM307887 P3/5mg/kg/W0
GSM307888 P5/10mg/kg/W0
Relations
BioProject PRJNA113623

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE12251_RAW.tar 115.8 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap