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Series GSE119013 Query DataSets for GSE119013
Status Public on Aug 25, 2018
Title Effect for target mRNA degradation by methylated microRNAs
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary To confirme the function of methylated micro RNAs (miR-17 and let-7a), we transfected methylated or non-methylated microRNAs to DICER KO HCT116 cell line. mRNA were isolated at 48 houes after transfection. This data show that the function were different between methylated or non-methylated microRNAs.
 
Overall design Methyated or non-methyated microRNAs were transfected in dicer KO HCT116 cell lines.
 
Contributor(s) Konno M, Asai A, Koseki J, Ishii H
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Submission date Aug 24, 2018
Last update date Mar 27, 2019
Contact name Ayumu Asai
E-mail(s) aasai@cfs.med.osaka-u.ac.jp
Organization name Osaka University
Street address 2-2 Yamadaoka
City Suita
ZIP/Postal code 565-0871
Country Japan
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (5)
GSM3356654 Sample 1_negative control
GSM3356655 Sample 2_let7a-native
GSM3356656 Sample 3_let7a-19A
Relations
BioProject PRJNA487774
SRA SRP158762

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE119013_processed_TPM_data.txt.gz 575.7 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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