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Series GSE118204 Query DataSets for GSE118204
Status Public on Oct 05, 2018
Title Reprogramming normal human epithelial tissues to a common, lethal neuroendocrine cancer lineage (ATAC-seq)
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Small cell carcinomas from different tissues exhibit transcriptional and epigenetic convergence and suggest common vulnerabilities for therapies
 
Overall design Convergent neuroendocrine cancer from distinct epithelial tissues
 
Contributor(s) Park JW
Citation(s) 30287662
Submission date Aug 07, 2018
Last update date Jan 19, 2022
Contact name Owen N Witte
E-mail(s) owenwitte@mednet.ucla.edu
Phone 3102066411
Organization name UCLA
Department MIMG
Street address 675 Charles E Young Dr S, 5720 MRL Bldg; MC 729022
City Los Angeles
State/province CA
ZIP/Postal code 90095-7290
Country USA
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (32)
GSM3320984 prostate: Basal1 ATAC-seq
GSM3320985 prostate: Basal2 ATAC-seq
GSM3320986 prostate: Basal3 ATAC-seq
This SubSeries is part of SuperSeries:
GSE118207 PARCB Project: Reprogramming normal human epithelial tissues to a common, lethal neuroendocrine cancer lineage
Relations
BioProject PRJNA484868
SRA SRP156525

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE118204_RAW.tar 8.9 Gb (http)(custom) TAR (of BIGWIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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