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GEO accession:
Series GSE118207
Query DataSets for GSE118207
Status
Public on Oct 05, 2018
Title
PARCB Project: Reprogramming normal human epithelial tissues to a common, lethal neuroendocrine cancer lineage
Organism
Homo sapiens
Experiment type
Genome binding/occupancy profiling by high throughput sequencing
Other
Expression profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
30287662
Submission date
Aug 07, 2018
Last update date
Feb 14, 2022
Contact name
Owen N Witte
E-mail(s)
owenwitte@mednet.ucla.edu
Phone
3102066411
Organization name
UCLA
Department
MIMG
Street address
675 Charles E Young Dr S, 5720 MRL Bldg; MC 729022
City
Los Angeles
State/province
CA
ZIP/Postal code
90095-7290
Country
USA
Platforms (2)
GPL11154
Illumina HiSeq 2000 (Homo sapiens)
GPL21290
Illumina HiSeq 3000 (Homo sapiens)
Samples (74)
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More...
GSM3320984
prostate: Basal1 ATAC-seq
GSM3320985
prostate: Basal2 ATAC-seq
GSM3320986
prostate: Basal3 ATAC-seq
GSM3320987
lung: NHBE1 ATAC-seq
GSM3320988
lung: NHBE4 ATAC-seq
GSM3320989
lung: NHBE5 ATAC-seq
GSM3320990
prostate: PARCB1 ATAC-seq
GSM3320991
prostate: PARCB3 ATAC-seq
GSM3320992
prostate: PARCB6 ATAC-seq
GSM3320993
prostate: PARCB8 ATAC-seq
GSM3320994
lung: NHBE1-PARCB1 ATAC-seq
GSM3320995
lung: NHBE1-PARCB2 ATAC-seq
GSM3320996
lung: NHBE4-PARCB1 ATAC-seq
GSM3320997
lung: NHBE4-PARCB2 ATAC-seq
GSM3320998
lung: NHBE5-PARCB ATAC-seq
GSM3320999
prostate: MSKCC-EF1 ATAC-seq
GSM3321000
prostate: NCI-H660 ATAC-seq
GSM3321001
prostate: ACB2 ATAC-seq
GSM3321002
prostate: ACB3 ATAC-seq
GSM3321003
prostate: ACB4 ATAC-seq
GSM3321004
prostate: ACB5 ATAC-seq
GSM3321005
prostate: PACB1 ATAC-seq
GSM3321006
prostate: PACB3 ATAC-seq
GSM3321007
prostate: PACB5 ATAC-seq
GSM3321008
prostate: ARCB4 ATAC-seq
GSM3321009
prostate: ARCB5 ATAC-seq
GSM3321010
prostate: ARCB6 ATAC-seq
GSM3321011
lung: NCI-H524 ATAC-seq
GSM3321012
lung: NCI-H1436 ATAC-seq
GSM3321013
lung: NCI-H1963 ATAC-seq
GSM3321014
lung: NCI-H2171 ATAC-seq
GSM3321015
lung: NCI-H2227 ATAC-seq
GSM3321016
prostate: PARCB2 Exome-seq
GSM3321017
prostate: PARCB3 Exome-seq
GSM3321018
prostate: PARCB5 Exome-seq
GSM3321019
lung: NHBE1-PARCB1 Exome-seq
GSM3321020
lung: NHBE4-PARCB1 Exome-seq
GSM3321021
lung: NHBE5-PARCB Exome-seq
GSM3321022
prostate: Basal1 RNA-seq
GSM3321023
prostate: Basal2 RNA-seq
GSM3321024
prostate: Basal3 RNA-seq
GSM3321025
lung: NHBE1 RNA-seq
GSM3321026
lung: NHBE4 RNA-seq
GSM3321027
lung: NHBE5 RNA-seq
GSM3321028
prostate: PARCB1 RNA-seq
GSM3321029
prostate: PARCB2 RNA-seq
GSM3321030
prostate: PARCB3 RNA-seq
GSM3321031
prostate: PARCB5 RNA-seq
GSM3321032
prostate: PARCB6 RNA-seq
GSM3321033
prostate: PARCB8 RNA-seq
GSM3321034
lung: NHBE1-PARCB1 RNA-seq
GSM3321035
lung: NHBE1-PARCB2 RNA-seq
GSM3321036
lung: NHBE4-PARCB1 RNA-seq
GSM3321037
lung: NHBE4-PARCB2 RNA-seq
GSM3321038
lung: NHBE5-PARCB RNA-seq
GSM3321039
prostate: 22RV1 RNA-seq
GSM3321040
prostate: LNCaP RNA-seq
GSM3321041
prostate: VCaP RNA-seq
GSM3321042
prostate: DU145 RNA-seq
GSM3321043
prostate: MSKCC-EF1 RNA-seq
GSM3321044
prostate: NCI-H660 RNA-seq
GSM3321045
prostate: ACB1 RNA-seq
GSM3321046
prostate: ACB2 RNA-seq
GSM3321047
prostate: ACB3 RNA-seq
GSM3321048
prostate: ACB4 RNA-seq
GSM3321049
prostate: ACB5 RNA-seq
GSM3321050
prostate: PACB1 RNA-seq
GSM3321051
prostate: PACB3 RNA-seq
GSM3321052
prostate: PACB4 RNA-seq
GSM3321053
prostate: PACB5 RNA-seq
GSM3321054
prostate: ARCB1 RNA-seq
GSM3321055
prostate: ARCB4 RNA-seq
GSM3321056
prostate: ARCB5 RNA-seq
GSM3321057
prostate: ARCB6 RNA-seq
This SuperSeries is composed of the following SubSeries:
GSE118204
Reprogramming normal human epithelial tissues to a common, lethal neuroendocrine cancer lineage (ATAC-seq)
GSE118205
Reprogramming normal human epithelial tissues to a common, lethal neuroendocrine cancer lineage (Whole Exome-seq)
GSE118206
Reprogramming normal human epithelial tissues to a common, lethal neuroendocrine cancer lineage (RNA-seq)
Relations
BioProject
PRJNA484866
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE118207_RAW.tar
13.0 Gb
(http)
(custom)
TAR (of BIGWIG, TAR, TXT)
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