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| Status |
Public on Jan 15, 2019 |
| Title |
Small RNAs deep sequencing from sweet potato in wounding stress |
| Organism |
Ipomoea batatas |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
Plant microRNAs (miRNAs) have emerged as important regulators in developmental processes and stress responses in plants. To identify the wound-responsive miRNAs in the leaves of sweet potato, small RNA deep sequencing was conducted on unwounded and wounded leaves (30 min). Total RNAs were isolated for library construction and analyzed by RNA-sequencing via Illumina Genome Analyzer IIx platform. About 16 million total reads were obtained for each sample.
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| Overall design |
Small RNAs deep sequencing from sweet potato in wounding stress.
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| Contributor(s) |
Kuo Y, Lin J, Jhu M, Li Y, Jeng S |
| Citation(s) |
30403812 |
| |
| Submission date |
May 31, 2018 |
| Last update date |
Jan 15, 2019 |
| Contact name |
Yun-Wei Kuo |
| Organization name |
National Taiwan University
|
| Department |
Plant Biology
|
| Street address |
No. 1, Sec. 4, Roosevelt Road
|
| City |
Taipei |
| ZIP/Postal code |
10617 |
| Country |
Taiwan |
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| Platforms (1) |
| GPL17085 |
Illumina Genome Analyzer IIx (Ipomoea batatas) |
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| Samples (2) |
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| Relations |
| BioProject |
PRJNA474012 |
| SRA |
SRP149466 |
