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Series GSE113406 Query DataSets for GSE113406
Status Public on Feb 26, 2019
Title Ablation of adipocyte BCL6 enhances subcutaneous adiposity and insulin sensitivity [RNA-seq]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary In adipocyte-specific knockout mice (Bcl6AKO), we found that Bcl6 deletion results in strikingly increased inguinal but not perigonadal adipocyte size and tissue mass in addition to marked insulin sensitivity. Genome-wide DNA binding and RNA expression analyses revealed that BCL6 controls gene networks involved in cell growth and fatty acid biosynthesis. Thus, our studies identify BCL6 as a negative regulator of subcutaneous adipose tissue expansion and metabolic health.
 
Overall design Identification of adipocyte BCL6-regulated genes
 
Contributor(s) Barish G
Citation(s) 30566857
Submission date Apr 19, 2018
Last update date Mar 25, 2019
Contact name Grant D. Barish
Organization name Northwestern University
Department Medicine
Street address 303 E Superior Street
City Chicago
State/province IL
ZIP/Postal code 60611
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (32)
GSM3105138 RNA_WT_ScAT_Male_1 [3782WT_ScAT]
GSM3105139 RNA_WT_ScAT_Male_2 [3801WT_ScAT]
GSM3105140 RNA_WT_ScAT_Male_3 [3802WT_ScAT]
This SubSeries is part of SuperSeries:
GSE113408 Ablation of adipocyte BCL6 enhances subcutaneous adiposity and insulin sensitivity
Relations
BioProject PRJNA451046
SRA SRP141266

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE113406_differentially_expressed_genes_females_inguinal_adipose.txt.gz 24.6 Kb (ftp)(http) TXT
GSE113406_differentially_expressed_genes_male_liver.txt.gz 771 b (ftp)(http) TXT
GSE113406_differentially_expressed_genes_males_inguinal_adipose.txt.gz 33.3 Kb (ftp)(http) TXT
GSE113406_differentially_expressed_genes_males_perigonadal_adipose.txt.gz 45.4 Kb (ftp)(http) TXT
GSE113406_inguinal_adipose_female_rawcounts.xlsx 79.6 Kb (ftp)(http) XLSX
GSE113406_inguinal_adipose_male_rawcounts.xlsx 99.5 Kb (ftp)(http) XLSX
GSE113406_liver_male_rawcounts.xlsx 43.2 Kb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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