|
| Status |
Public on Jan 07, 2021 |
| Title |
Transcriptomic analysis of HCT116 cells cultured under different oxygen conditions |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
|
| Summary |
To explore the molecular basis of hypoxic response, we analyzed gene expression profiles of HCT116 cells cultured under different oxygen conditions with or without inhibition of P53 signaling or fatty acid b oxidation (FAO).
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| |
|
| Overall design |
HCT116 cells were cultured normoxically or hypoxically with or without pharmacological inhibition of P53 signaling or fatty acid b oxidation (FAO) and then subjected to transcriptomic analysis.
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| |
|
| Contributor(s) |
Wakui M |
| Citation(s) |
30591458 |
| |
| Submission date |
Jan 17, 2018 |
| Last update date |
Jan 07, 2021 |
| Contact name |
Masatoshi Wakui |
| E-mail(s) |
wakuism@a6.keio.jp
|
| Organization name |
Keio University School of Medicine
|
| Department |
Department of Laboratory Medicine
|
| Street address |
35 Shinanomachi, Shinjuku-ku
|
| City |
Tokyo |
| ZIP/Postal code |
160-8582 |
| Country |
Japan |
| |
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| Platforms (2) |
| GPL4133 |
Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) |
| GPL13607 |
Agilent-028004 SurePrint G3 Human GE 8x60K Microarray (Feature Number version) |
|
| Samples (16)
|
| GSM2938768 |
HCT116, acute normoxia without P53 inhibition |
| GSM2938769 |
HCT116, acute normoxia with P53 inhibition |
| GSM2938770 |
HCT116, acute hypoxia without P53 inhibition |
| GSM2938771 |
HCT116, acute hypoxia with P53 inhibition |
| GSM2938772 |
HCT116, chronic normoxia without P53 inhibition |
| GSM2938773 |
HCT116, chronic normoxia with P53 inhibition |
| GSM2938774 |
HCT116, chronic hypoxia without P53 inhibition |
| GSM2938775 |
HCT116, chronic hypoxia with P53 inhibition |
| GSM2938776 |
HCT116, chronic normoxia without FAO inhibition followed by acute hypoxia |
| GSM2938777 |
HCT116, chronic normoxia with FAO inhibition followed by acute hypoxia |
| GSM2938778 |
HCT116, chronic hypoxia without FAO inhibition followed by acute hypoxia |
| GSM2938779 |
HCT116, chronic hypoxia with FAO inhibition followed by acute hypoxia |
| GSM2938780 |
HCT116, chronic normoxia without FAO inhibition |
| GSM2938781 |
HCT116, chronic normoxia with FAO inhibition |
| GSM2938782 |
HCT116, chronic hypoxia without FAO inhibition |
| GSM2938783 |
HCT116, chronic hypoxia with FAO inhibition |
|
| Relations |
| BioProject |
PRJNA430679 |
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