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Series GSE108946 Query DataSets for GSE108946
Status Public on May 13, 2019
Title Transcriptome time course of mouse acute myeloid leukemia cells upon PU.1 restoration and knockdown
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We have utilized advanced RNAi technology to dynamically restore and subsequently knock down endogenous PU.1 expression in p53-deficient AML cells, which respectively causes differentiation and de-differentiation
 
Overall design RNA-seq was performed on AML246 cells following Dox treatment or withdrawal over a 24 day time course
 
Contributor(s) Liu R, Oxley EP, Dickins RA, Ritchie ME
Citation(s) 31374198
Submission date Jan 09, 2018
Last update date Aug 05, 2019
Contact name Ruijie Liu
E-mail(s) cynthia.liu@adelaide.edu.au
Organization name the university of Adelaide
Street address Mudla Wirra Rd
City Roseworthy
State/province South Australia
ZIP/Postal code 5371
Country Australia
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (16)
GSM2916385 Day0 replicate A
GSM2916386 Day0 replicate B
GSM2916387 Day4 replicate A
This SubSeries is part of SuperSeries:
GSE76934 Reversible transitions between transformed and differentiated states in AML
Relations
BioProject PRJNA429228
SRA SRP128540

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE108946_RAW.tar 1.5 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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