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Series GSE108240 Query DataSets for GSE108240
Status Public on Dec 15, 2020
Title Mutations in Bcl9 and Pygo genes cause congenital heart defects by tissue-specific perturbation of Wnt/β-catenin signaling
Organism Danio rerio
Experiment type Expression profiling by high throughput sequencing
Summary A CRISPR-Cas9-based zebrafish screen for candidate genes causative of human heart disease uncovers cardiac defects when perturbing Bcl9.
 
Overall design bcl9∆29/29
 
Contributor(s) Mosimann C, Felker A, Chiavacci E, Cabello E
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Dec 18, 2017
Last update date Dec 15, 2020
Contact name Christian Mosimann
E-mail(s) christian.mosimann@imls.uzh.ch
Organization name University of Zürich
Department Institute of Molecular Life Sciences
Lab Mosimann Lab
Street address Winterthurerstrasse 190
City Zürich
ZIP/Postal code 8057
Country Switzerland
 
Platforms (1)
GPL18413 Illumina HiSeq 2500 (Danio rerio)
Samples (6)
GSM2893553 Wildtype replicate 1
GSM2893554 Mutant replicate 1
GSM2893555 Wildtype replicate 2
Relations
BioProject PRJNA422899
SRA SRP126965

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE108240_RNA-seq_zebrafish_Normalized_counts.xlsx 1.0 Mb (ftp)(http) XLSX
GSE108240_RNA-seq_zebrafish_raw_counts.xlsx 672.6 Kb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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