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GEO accession:
Series GSE106139
Query DataSets for GSE106139
Status
Public on Dec 21, 2017
Title
Regulation of natural killer cells during MCMV infection
Organism
Mus musculus
Experiment type
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
29222089
,
30134157
,
30082830
,
32045471
Submission date
Oct 25, 2017
Last update date
May 04, 2023
Contact name
Colleen Lau
Organization name
Cornell University
Department
Microbiology & Immunology
Street address
930 Campus Road
City
Ithaca
State/province
New York
ZIP/Postal code
14850
Country
USA
Platforms (1)
GPL17021
Illumina HiSeq 2500 (Mus musculus)
Samples (167)
Less...
More...
GSM2830294
aSTAT4_STAT4WT_STIM_1_CHIP
GSM2830295
aSTAT4_STAT4WT_STIM_1_INPUT
GSM2830296
aSTAT4_STAT4WT_STIM_2_CHIP
GSM2830297
aSTAT4_STAT4WT_STIM_2_INPUT
GSM2830298
aSTAT4_STAT4WT_STIM_3_CHIP
GSM2830299
aSTAT4_STAT4WT_STIM_3_INPUT
GSM2830300
aSTAT4_STAT4WT_UNSTIM_2_CHIP
GSM2830301
aSTAT4_STAT4WT_UNSTIM_2_INPUT
GSM2830302
aSTAT4_STAT4KO_STIM_3_CHIP
GSM2830303
aSTAT4_STAT4KO_STIM_3_INPUT
GSM2830304
aH3K4me3_STAT4WT_STIM_1_CHIP
GSM2830305
aH3K4me3_STAT4WT_STIM_1_INPUT
GSM2830306
aH3K4me3_STAT4KO_STIM_1_CHIP
GSM2830307
aH3K4me3_STAT4KO_STIM_1_INPUT
GSM2830308
aH3K4me3_STAT4WT_UNSTIM_1_CHIP
GSM2830309
aH3K4me3_STAT4WT_UNSTIM_1_INPUT
GSM2830310
aH3K4me3_STAT4KO_UNSTIM_1_CHIP
GSM2830311
aH3K4me3_STAT4KO_UNSTIM_1_INPUT
GSM2830312
NK_d0_1
GSM2830313
NK_d0_2
GSM2830314
NK_d2_1
GSM2830315
NK_d2_2
GSM2830316
IL12IL18_01
GSM2830317
IL12IL18_02
GSM2830318
IL15_01
GSM2830319
IL15_02
GSM2830320
unstim_01
GSM2830321
unstim_02
GSM2830322
RUNX1KO_F1
GSM2830323
WT_F1
GSM2830324
RUNX1KO_M1
GSM2830325
WT_M1
GSM2830326
RUNX1KO_M2
GSM2830327
WT_M2
GSM2830328
STAT4KO_HNEG_D0_001
GSM2830329
STAT4KO_HNEG_D0_002
GSM2830330
STAT4WT_HNEG_D0_001
GSM2830331
STAT4WT_HNEG_D0_002
GSM2830332
STAT4KO_HPOS_D0_001
GSM2830333
STAT4KO_HPOS_D0_002
GSM2830334
STAT4WT_HPOS_D0_001
GSM2830335
STAT4WT_HPOS_D0_002
GSM2830336
STAT4KO_HNEG_D2_001
GSM2830337
STAT4KO_HNEG_D2_002
GSM2830338
STAT4KO_HNEG_D2_003
GSM2830339
STAT4WT_HNEG_D2_001
GSM2830340
STAT4WT_HNEG_D2_002
GSM2830341
STAT4WT_HNEG_D2_003
GSM2830342
STAT4KO_HPOS_D2_001
GSM2830343
STAT4KO_HPOS_D2_002
GSM2830344
STAT4KO_HPOS_D2_003
GSM2830345
STAT4WT_HPOS_D2_001
GSM2830346
STAT4WT_HPOS_D2_002
GSM2830347
STAT4WT_HPOS_D2_003
GSM2888512
STAT4WT_HPOS_D0_001 [ATAC-seq]
GSM2888513
STAT4WT_HPOS_D0_002 [ATAC-seq]
GSM2888514
STAT4WT_HPOS_D0_003 [ATAC-seq]
GSM2888515
STAT4WT_HPOS_D2_001 [ATAC-seq]
GSM2888516
STAT4WT_HPOS_D2_002 [ATAC-seq]
GSM2888517
STAT4WT_HPOS_D2_003 [ATAC-seq]
GSM2888518
STAT4KO_HPOS_D0_001 [ATAC-seq]
GSM2888519
STAT4KO_HPOS_D0_002 [ATAC-seq]
GSM2888520
STAT4KO_HPOS_D0_003 [ATAC-seq]
GSM2888521
STAT4KO_HPOS_D2_001 [ATAC-seq]
GSM2888522
STAT4KO_HPOS_D2_002 [ATAC-seq]
GSM2888523
STAT4KO_HPOS_D2_003 [ATAC-seq]
GSM2888524
STAT1WT_HPOS_D0_001 [ATAC-seq]
GSM2888525
STAT1WT_HPOS_D0_002 [ATAC-seq]
GSM2888526
STAT1WT_HPOS_D0_003 [ATAC-seq]
GSM2888527
STAT1WT_HPOS_D2_001 [ATAC-seq]
GSM2888528
STAT1WT_HPOS_D2_002 [ATAC-seq]
GSM2888529
STAT1WT_HPOS_D2_003 [ATAC-seq]
GSM2888530
STAT1KO_HPOS_D0_001 [ATAC-seq]
GSM2888531
STAT1KO_HPOS_D0_002 [ATAC-seq]
GSM2888532
STAT1KO_HPOS_D0_003 [ATAC-seq]
GSM2888533
STAT1KO_HPOS_D2_001 [ATAC-seq]
GSM2888534
STAT1KO_HPOS_D2_003 [ATAC-seq]
GSM2888535
NK_D0_1 [ATAC-seq]
GSM2888536
NK_D0_2 [ATAC-seq]
GSM2888537
NK_D0_3 [ATAC-seq]
GSM2888538
NK_D2_1 [ATAC-seq]
GSM2888539
NK_D2_2 [ATAC-seq]
GSM2888540
NK_D2_3 [ATAC-seq]
GSM2888541
NK_D4_1 [ATAC-seq]
GSM2888542
NK_D4_2 [ATAC-seq]
GSM2888543
NK_D4_3 [ATAC-seq]
GSM2888544
NK_D7_1 [ATAC-seq]
GSM2888545
NK_D7_2 [ATAC-seq]
GSM2888546
NK_D7_3 [ATAC-seq]
GSM2888547
NK_D7_4 [ATAC-seq]
GSM2888548
NK_D14_1 [ATAC-seq]
GSM2888549
NK_D14_2 [ATAC-seq]
GSM2888550
NK_D14_3 [ATAC-seq]
GSM2888551
NK_D35_1 [ATAC-seq]
GSM2888552
NK_D35_2 [ATAC-seq]
GSM2888553
NK_D35_3 [ATAC-seq]
GSM2888554
CD8_D0_1 [ATAC-seq]
GSM2888555
CD8_D0_2 [ATAC-seq]
GSM2888556
CD8_D0_3 [ATAC-seq]
GSM2888557
CD8m45_D7_1 [ATAC-seq]
GSM2888558
CD8m45_D7_2 [ATAC-seq]
GSM2888559
CD8m45_D7_3 [ATAC-seq]
GSM2888560
CD8m45_D35_1 [ATAC-seq]
GSM2888561
CD8m45_D35_2 [ATAC-seq]
GSM2888562
CD8m45_D35_3 [ATAC-seq]
GSM2888595
aSTAT1_STAT1WT_STIM_1_CHIP
GSM2888596
aSTAT1_STAT1WT_STIM_1_INPUT
GSM2888597
aSTAT1_STAT1WT_STIM_2_CHIP
GSM2888598
aSTAT1_STAT1WT_STIM_2_INPUT
GSM2888601
STAT1WT_HPOS_D0_001
GSM2888602
STAT1WT_HPOS_D0_002
GSM2888603
STAT1WT_HPOS_D2_001
GSM2888604
STAT1WT_HPOS_D2_002
GSM2888605
STAT1KO_HPOS_D0_001
GSM2888606
STAT1KO_HPOS_D0_002
GSM2888607
STAT1KO_HPOS_D2_001
GSM2888608
STAT1KO_HPOS_D2_002
GSM2888609
NK_d4_1
GSM2888610
NK_d4_2
GSM2888611
NK_d7_1
GSM2888612
NK_d7_2
GSM2888613
NK_d14_1
GSM2888614
NK_d14_2
GSM2888615
NK_d35_1
GSM2888616
NK_d35_2
GSM2888617
CD8_d0_1
GSM2888618
CD8_d0_2
GSM2888619
CD8_d0_3
GSM2888620
CD8m45_d7_1
GSM2888621
CD8m45_d7_2
GSM2888622
CD8m45_d35_1
GSM2888623
CD8m45_d35_2
GSM3259730
aIRF9_IRF9WT_STIM_1_CHIP
GSM3259731
aIRF9_IRF9WT_STIM_1_INPUT
GSM3259732
aIRF9_IRF9WT_STIM_2_CHIP
GSM3259733
aIRF9_IRF9WT_STIM_2_INPUT
GSM3259734
aIRF9_IRF9WT_STIM_3_CHIP
GSM3259735
aIRF9_IRF9WT_STIM_3_INPUT
GSM3259736
IFNa_01
GSM3259737
IFNa_02
GSM3259738
IFNARKO_HPOS_D0_002
GSM3259739
IFNARKO_HPOS_D2_001
GSM3259740
IFNARKO_HPOS_D2_002
GSM3259741
IFNARWT_HPOS_D0_001
GSM3259742
IFNARWT_HPOS_D0_002
GSM3259743
IFNARWT_HPOS_D2_001
GSM3259744
IFNARWT_HPOS_D2_002
GSM3259745
IRF9KO_HPOS_D0_1
GSM3259746
IRF9KO_HPOS_D4_1
GSM3259747
IRF9KO_HPOS_D4_2
GSM3259748
IRF9KO_HPOS_D4_3
GSM3259749
IRF9WT_HPOS_D0_1
GSM3259750
IRF9WT_HPOS_D4_1
GSM3259751
IRF9WT_HPOS_D4_2
GSM3259752
IRF9WT_HPOS_D4_3
GSM4154208
IL12RKO_HPOS_D0_001
GSM4154209
IL12RKO_HPOS_D0_002
GSM4154210
IL12RWT_HPOS_D0_001
GSM4154211
IL12RWT_HPOS_D0_002
GSM4154212
IL12RKO_HPOS_D2_001
GSM4154213
IL12RKO_HPOS_D2_002
GSM4154214
IL12RKO_HPOS_D2_003
GSM4154215
IL12RWT_HPOS_D2_001
GSM4154216
IL12RWT_HPOS_D2_002
GSM4154217
IL12RWT_HPOS_D2_003
GSM4154218
IL12_01
GSM4154219
IL12_02
This SuperSeries is composed of the following SubSeries:
GSE106137
Transcriptional and epigenetic regulation of adaptive NK cell responses [ChIP-Seq]
GSE106138
Transcriptional regulation of adaptive NK and CD8 T cell responses [RNA-Seq]
GSE108051
Epigenetic control of innate and adaptive immune memory [ATAC-Seq]
Relations
BioProject
PRJNA415717
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE106139_RAW.tar
32.2 Gb
(http)
(custom)
TAR (of BIGWIG, BW)
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