|
| Status |
Public on Feb 15, 2018 |
| Title |
Genome-wide biding assay of GTL1 and DF1 |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Genome binding/occupancy profiling by genome tiling array
|
| Summary |
We performed a chromatin immunoprecipitation-based microarray experiment (ChIP chip) in order to identify GTL1 and DF1 direct target genes
|
| |
|
| Overall design |
GTL1 and DF1 ChIP was performed with a GFP antibody for two independent biological replicates for each genotype. On each array of GTL1/DF1 and control samples were hybridized in different colors. Moreover, a dye swap was perfomed.
|
| |
|
| Contributor(s) |
Shibata M, Breuer C, Kawamura A, Clark NM, Rymen B, Braidwood L, Morohashi K, Bruch W, Benfey PN, Sozzani R, Sugimoto K |
| Citation(s) |
29439132 |
| |
| Submission date |
Sep 19, 2017 |
| Last update date |
Jul 25, 2021 |
| Contact name |
Michitaro Shibata |
| E-mail(s) |
michitaro.shibata@riken.jp
|
| Organization name |
RIKEN
|
| Department |
CSRS
|
| Lab |
Cell function research team
|
| Street address |
1-7-22 Suehirocho Tsurumi
|
| City |
Yokohama |
| State/province |
Kanagawa |
| ZIP/Postal code |
230-0045 |
| Country |
Japan |
| |
|
| Platforms (1) |
| GPL10326 |
Agilent-015210 Benfey/Cui Arabidopsis custom whole genome promoter array 244k v1.0 |
|
| Samples (8)
|
|
| Relations |
| BioProject |
PRJNA408132 |
Less...
More...