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Status
Public on Jan 02, 2004
Title
Agilent-012097 Human 1A Microarray (V2) G4110B (Feature Number version)
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Homo sapiens Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Catalog number
G4110B
Description
Submission date
Jan 02, 2004
Last update date
Dec 06, 2012
Organization
Agilent Technologies
E-mail(s)
cag_sales-na@agilent.com Phone
877-424-4536
URL
http://www.agilent.com Department
Street address
City
Palo Alto
State/province
CA
ZIP/Postal code
94304
Country
USA
Samples (2172)
GSM21742 , GSM21743 , GSM21744 , GSM21745 , GSM21746 , GSM21747
GSM21748 ,
GSM21749 ,
GSM21750 ,
GSM21751 ,
GSM21752 ,
GSM21753 ,
GSM21758 ,
GSM21759 ,
GSM21761 ,
GSM21763 ,
GSM21765 ,
GSM21767 ,
GSM21769 ,
GSM21771 ,
GSM21772 ,
GSM29551 ,
GSM29552 ,
GSM29553 ,
GSM29554 ,
GSM29555 ,
GSM29556 ,
GSM29557 ,
GSM29558 ,
GSM29559 ,
GSM29560 ,
GSM29561 ,
GSM29562 ,
GSM34423 ,
GSM34424 ,
GSM34425 ,
GSM34426 ,
GSM34427 ,
GSM34428 ,
GSM34429 ,
GSM34430 ,
GSM34437 ,
GSM34439 ,
GSM34440 ,
GSM34441 ,
GSM34442 ,
GSM34443 ,
GSM34461 ,
GSM34462 ,
GSM34463 ,
GSM34464 ,
GSM34465 ,
GSM34466 ,
GSM34467 ,
GSM34468 ,
GSM34470 ,
GSM34471 ,
GSM34476 ,
GSM34477 ,
GSM34478 ,
GSM34484 ,
GSM34485 ,
GSM34487 ,
GSM34489 ,
GSM34490 ,
GSM34491 ,
GSM34492 ,
GSM34493 ,
GSM34499 ,
GSM34504 ,
GSM34505 ,
GSM34506 ,
GSM34507 ,
GSM34508 ,
GSM34510 ,
GSM34512 ,
GSM34513 ,
GSM34514 ,
GSM34515 ,
GSM34516 ,
GSM34517 ,
GSM34518 ,
GSM34519 ,
GSM34521 ,
GSM34522 ,
GSM34523 ,
GSM34525 ,
GSM34526 ,
GSM34527 ,
GSM34528 ,
GSM34529 ,
GSM34530 ,
GSM34531 ,
GSM34532 ,
GSM34533 ,
GSM34556 ,
GSM34557 ,
GSM34568 ,
GSM45610 ,
GSM45611 ,
GSM45614 ,
GSM45615 ,
GSM45651 ,
GSM45652 ,
GSM45653 ,
GSM45654 ,
GSM45655 ,
GSM45656 ,
GSM45665 ,
GSM45666 ,
GSM45667 ,
GSM45668 ,
GSM45669 ,
GSM45670 ,
GSM45671 ,
GSM45672 ,
GSM45673 ,
GSM45674 ,
GSM48252 ,
GSM48253 ,
GSM48254 ,
GSM48255 ,
GSM48350 ,
GSM48501 ,
GSM48503 ,
GSM48507 ,
GSM48510 ,
GSM48539 ,
GSM48541 ,
GSM48543 ,
GSM48546 ,
GSM48584 ,
GSM48585 ,
GSM48586 ,
GSM48587 ,
GSM48588 ,
GSM50143 ,
GSM50147 ,
GSM50148 ,
GSM50151 ,
GSM50153 ,
GSM50154 ,
GSM50155 ,
GSM50156 ,
GSM50157 ,
GSM50809 ,
GSM50810 ,
GSM52883 ,
GSM52884 ,
GSM52910 ,
GSM52911 ,
GSM52912 ,
GSM52914 ,
GSM52915 ,
GSM52916 ,
GSM52917 ,
GSM52918 ,
GSM52919 ,
GSM52920 ,
GSM52921 ,
GSM52922 ,
GSM53475 ,
GSM53476 ,
GSM53477 ,
GSM71552 ,
GSM71557 ,
GSM78879 ,
GSM78880 ,
GSM78881 ,
GSM78882 ,
GSM78883 ,
GSM78884 ,
GSM78885 ,
GSM78886 ,
GSM78887 ,
GSM78888 ,
GSM78889 ,
GSM78890 ,
GSM78891 ,
GSM78892 ,
GSM78893 ,
GSM78894 ,
GSM78895 ,
GSM78896 ,
GSM78897 ,
GSM78898 ,
GSM78899 ,
GSM78900 ,
GSM78901 ,
GSM78902 ,
GSM78903 ,
GSM78904 ,
GSM78905 ,
GSM78906 ,
GSM78907 ,
GSM78908 ,
GSM78909 ,
GSM78910 ,
GSM78911 ,
GSM78912 ,
GSM78913 ,
GSM78914 ,
GSM78915 ,
GSM78916 ,
GSM78917 ,
GSM78918 ,
GSM78919 ,
GSM78920 ,
GSM78921 ,
GSM78922 ,
GSM78923 ,
GSM78924 ,
GSM78925 ,
GSM78926 ,
GSM78927 ,
GSM78928 ,
GSM78929 ,
GSM78930 ,
GSM78931 ,
GSM78932 ,
GSM78933 ,
GSM78934 ,
GSM78935 ,
GSM78936 ,
GSM78937 ,
GSM78938 ,
GSM78939 ,
GSM78940 ,
GSM78941 ,
GSM78942 ,
GSM78943 ,
GSM78944 ,
GSM78945 ,
GSM78946 ,
GSM78947 ,
GSM78948 ,
GSM78949 ,
GSM78950 ,
GSM78951 ,
GSM78952 ,
GSM78953 ,
GSM78954 ,
GSM78955 ,
GSM78956 ,
GSM78957 ,
GSM78958 ,
GSM78959 ,
GSM78960 ,
GSM78961 ,
GSM78962 ,
GSM78963 ,
GSM78964 ,
GSM78965 ,
GSM78966 ,
GSM78967 ,
GSM80213 ,
GSM80223 ,
GSM80224 ,
GSM80231 ,
GSM80233 ,
GSM80235 ,
GSM80238 ,
GSM80242 ,
GSM80245 ,
GSM80246 ,
GSM81164 ,
GSM81165 ,
GSM81179 ,
GSM81180 ,
GSM81181 ,
GSM81182 ,
GSM81183 ,
GSM81184 ,
GSM81185 ,
GSM81186 ,
GSM81187 ,
GSM81188 ,
GSM81961 ,
GSM81962 ,
GSM81963 ,
GSM81964 ,
GSM81965 ,
GSM81966 ,
GSM81967 ,
GSM81968 ,
GSM81969 ,
GSM81970 ,
GSM81971 ,
GSM81972 ,
GSM87961 ,
GSM87962 ,
GSM87963 ,
GSM87964 ,
GSM87965 ,
GSM87966 ,
GSM87967 ,
GSM87968 ,
GSM87969 ,
GSM87970 ,
GSM87971 ,
GSM87972 ,
GSM87973 ,
GSM87974 ,
GSM87975 ,
GSM87976 ,
GSM87977 ,
GSM87978 ,
GSM87979 ,
GSM87980 ,
GSM87981 ,
GSM87982 ,
GSM87983 ,
GSM87984 ,
GSM87985 ,
GSM87986 ,
GSM87987 ,
GSM87988 ,
GSM87989 ,
GSM87990 ,
GSM87991 ,
GSM87992 ,
GSM87993 ,
GSM87994 ,
GSM87995 ,
GSM87996 ,
GSM87997 ,
GSM87998 ,
GSM87999 ,
GSM88000 ,
GSM88001 ,
GSM88002 ,
GSM88003 ,
GSM88004 ,
GSM88005 ,
GSM88006 ,
GSM88007 ,
GSM88008 ,
GSM88009 ,
GSM88010 ,
GSM88011 ,
GSM88012 ,
GSM88013 ,
GSM88014 ,
GSM88015 ,
GSM88016 ,
GSM88017 ,
GSM88018 ,
GSM88019 ,
GSM88020 ,
GSM88021 ,
GSM88022 ,
GSM88023 ,
GSM88024 ,
GSM88025 ,
GSM88026 ,
GSM88027 ,
GSM88028 ,
GSM88029 ,
GSM88030 ,
GSM88031 ,
GSM88032 ,
GSM88033 ,
GSM88034 ,
GSM88035 ,
GSM88036 ,
GSM88037 ,
GSM112271 ,
GSM112272 ,
GSM112273 ,
GSM112274 ,
GSM112275 ,
GSM112276 ,
GSM112277 ,
GSM112278 ,
GSM112279 ,
GSM112280 ,
GSM112281 ,
GSM112282 ,
GSM112283 ,
GSM112284 ,
GSM112285 ,
GSM112286 ,
GSM112287 ,
GSM112288 ,
GSM112289 ,
GSM112290 ,
GSM112291 ,
GSM112292 ,
GSM112293 ,
GSM112294 ,
GSM112295 ,
GSM112296 ,
GSM112297 ,
GSM112298 ,
GSM119878 ,
GSM119879 ,
GSM119880 ,
GSM119881 ,
GSM119882 ,
GSM119883 ,
GSM119884 ,
GSM119885 ,
GSM119886 ,
GSM119887 ,
GSM119888 ,
GSM119889 ,
GSM119890 ,
GSM119891 ,
GSM119892 ,
GSM119893 ,
GSM119895 ,
GSM119896 ,
GSM119897 ,
GSM119898 ,
GSM119900 ,
GSM119901 ,
GSM119902 ,
GSM119903 ,
GSM132453 ,
GSM132475 ,
GSM132476 ,
GSM132477 ,
GSM132478 ,
GSM132479 ,
GSM132480 ,
GSM132481 ,
GSM132482 ,
GSM132483 ,
GSM135282 ,
GSM135283 ,
GSM135284 ,
GSM135285 ,
GSM135286 ,
GSM135287 ,
GSM135288 ,
GSM135289 ,
GSM135314 ,
GSM135315 ,
GSM135316 ,
GSM135317 ,
GSM135318 ,
GSM135319 ,
GSM135320 ,
GSM135321 ,
GSM137433 ,
GSM137434 ,
GSM137435 ,
GSM137436 ,
GSM137437 ,
GSM137438 ,
GSM137439 ,
GSM137440 ,
GSM137441 ,
GSM137442 ,
GSM137443 ,
GSM137444 ,
GSM137445 ,
GSM137446 ,
GSM137447 ,
GSM137448 ,
GSM137449 ,
GSM137450 ,
GSM137451 ,
GSM137452 ,
GSM137453 ,
GSM137454 ,
GSM137455 ,
GSM137456 ,
GSM137457 ,
GSM137458 ,
GSM137459 ,
GSM137460 ,
GSM137461 ,
GSM137462 ,
GSM137463 ,
GSM137464 ,
GSM137465 ,
GSM137466 ,
GSM137467 ,
GSM137468 ,
GSM137469 ,
GSM137470 ,
GSM137471 ,
GSM137472 ,
GSM137473 ,
GSM137474 ,
GSM137475 ,
GSM137476 ,
GSM137477 ,
GSM137478 ,
GSM137479 ,
GSM137480 ,
GSM137481 ,
GSM137482 ,
GSM137483 ,
GSM137484 ,
GSM137485 ,
GSM137486 ,
GSM137487 ,
GSM137488 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here Series (98)
GSE1322 laughter regulates postprandial blood glucose levels and gene expression
GSE1706 High Reproducibility Using Sodium Hydroxide Stripped Long Oligonucleotide DNA Microarrays
GSE1992 A New Breast Tumor Intrinsic Gene List Identifies Novel Characteristics that are Conserved Across Microarray Platforms
GSE2428 Novel N-terminal Glucocorticoid Receptor Isoforms with Unique Transcriptional Target Genes
GSE2550 Gene expression profiling of Acute Promyelocytic Leukemia identifies two subtypes mainly associated with FLT3 ITD
GSE2607 Biological Classification of Breast Cancer by Real-Time Quantitative RTPCR: Comparisons to Microarray and Histopathology
GSE2646 Pancreatic cancer drug treatment study
GSE2740 Estrogen-regulated genes predict survival in estrogen receptor and/or progesterone receptor-positive breast cancers
GSE2741 Breast Tumor's study
GSE3165 Identification of conserved gene expression features across human and murine mammary tumors
GSE3178 Gene expression patterns associated with p53 status in breast cancer
GSE3492 Whole-blood samples from women exposed to hormone replacement therapy
GSE3521 A compact VEGF signature associated with distant metastases and poor outcomes
GSE3573 Transcriptional effect of various iron treatments on Caco-2 cells.
GSE3838 Temporal expression profile of CHRF-288 cell line after phorbol ester stimulation
GSE3839 Temporal expression profile of megakaryocytic differentiation primary CD34+ cell culture
GSE4974 thrombopoietin-induced megakaryocyte differentiation with and without nicotinamide
GSE5310 hGRβ: Elucidation of its Role in Transcriptional Regulation and Identification of a Ligand
GSE5665 MDA-MB-435 Cells treated with 2-methoxyestradiol versus control DMSO
GSE5796 A Link between the N363S Glucocorticoid Receptor Polymorphism and Altered Gene Expression Related to Human Disease
GSE5917 Temporal expression profile of granulocytic differentiation of primary CD34+ cells cultured under 20% O2 levels
GSE5918 Temporal expression profile of granulocytic differentiation of primary CD34+ cells cultured under 5% O2 levels
GSE5922 Temporal expression profile of granulocytic differentiation of primary CD34+ cells cultured under 5% and 20% O2 levels
GSE6128 EGFR signaling varies with breast tumor subtype
GSE6130 Agreement in Breast Cancer Classification between Microarray and qRT-PCR from Fresh-Frozen and Formalin-Fixed Tissues
GSE6607 Temporal expression profile of primary T cell culture and T cell response to Oxidative stress
GSE6722 Agilent _CRUK_platform_comparison
GSE6792 Expression profile of mature normal PB neutrophils
GSE6887 Gene expression profile of peripheral blood lymphocytes: comparison between melanoma patients and healthy controls
GSE6902 Profiles of global gene expression in ionizing radiation-damaged human diploid fibroblasts
GSE6971 ATM-dependent regulation of gene expression upon DNA damage in human fibroblasts
GSE7075 Identification of Primary Transcriptional Regulation of Cell-Cycle-Regulated Genes upon DNA Damage
GSE7246 Human epithelial cell line (HL) infected with Chlamydia pneumoniae
GSE7543 Differential gene expression between individuals exposed to different levels of air pollution
GSE7571 Temporal expression profile of primary CD4+ T cell activation
GSE7572 Temporal expression profile of primary CD8+ T cell activation
GSE7604 Human Colon tumor vs Normal Human DNA
GSE7606 Human Melanoma vs Normal Human DNA
GSE7615 Cancer Process Study
GSE7771 Glycodelin-induced changes in MCF-7 breast cancer cells
GSE8465 A Phase II Study of Neoadjuvant Gemcitabine Plus Doxorubicin Followed by Gemcitabine Plus Cisplatin in Breast Cancer
GSE8871 Human Breast Cancer Cell Lines: Control vs. Fn14 or Luciferase siRNA Treated
GSE8914 CHRF-288-11 and primary human megakaryocytic cell cultures provide novel insights into lineage-specific differentiation
GSE9194 Comparison of human epididymal gene expression in the caput epididymides of infertile and fertile patients
GSE9210 A testicular gene expression profile for NOA patients, and ART3 as a genetic susceptibility gene for NOA
GSE9309 Recovery of biological information under heterogeneous experimental conditions using subgroup standardization.
GSE9377 Endomyocardial biopsies with different acute rejection gradings
GSE9800 Expression signature of cardiac muscle as a potential diagnostic or prognostic tool for dilated cardiomyopathy
GSE9885 Gene expression profiling in glioblastoma and immunohistochemical evaluation of IGFBP-2 and CDC20
GSE10419 Global expression profiles in one hour biopsy of human kidney transplantation from donors after cardiac death
GSE10758 Gene expression variation increase in trisomy 21 tissues
GSE10884 Loss of the retinoblastoma tumor suppressor is a common event in Basal-like and Luminal B breast carcinomas
GSE10885 An integromic analysis reveals that metaplastic carcinomas are distinct from basal-like tumors.
GSE10886 A Supervised Risk Predictor of Breast Cancer Based on Biological Subtypes
GSE10893 Basal-like Breast Cancer DNA copy number losses identify genes involved in genomic instability, response to therapy, and patient survival
GSE10993 CD99 inhibits neural differentiation of human Ewing sarcoma cells
GSE11204 Altered gene expression and DNA damage in peripheral blood cells from Friedreich's ataxia patients
GSE12059 HeLa cell response to overexpression of wild type and mutated forms of the P19 splice variant of c-H-ras
GSE12144 Comparative Analysis of Genes Induced by Respiratory Syncytial Virus and DsRNA in Human Epithelial Cells
GSE12171 RIP-Chip analysis of Musashi (Msi1)
GSE12470 Gene expression profiles of serous ovarian cancer samples
GSE13430 Acetaminophen-induced gene expression profiles in sandwich-cultured primary human hepatocytes
GSE13465 Acetaminophen-induced gene expression profiles in sandwich-cultured primary rat hepatoctyes
GSE14206 Analysis of ETS gene expression patterns uncovers novel ETS mediated gene silencing pathways in prostate cancers
GSE15331 mRNA expression in human hepatitis c virus (HCV) liver biopsy samples
GSE15387 microRNA and mRNA expression in human hepatitis C Virus
GSE15393 Building Prognostic Models for Breast Cancer Patients Using Clinical Variables and Gene Expression Signatures
GSE15399 Global analysis of differential polyadenylation of mRNAs during mitotic cell cycle: S phase versus G2/M phase.
GSE15523 A Core MYC Gene Expression Signature is prominent in basal-like cancer
GSE15547 Expression profiling of HeLa cells at S and G2/M phases of mitotic cell cycle.
GSE16120 Gene profiling, mutations and expression of epidermal growth factor receptor in androgen-dependent prostate cancer
GSE17040 Functional ER alpha transcriptional regulatory network for cell cycle in an ER(+) breast cancer subgroup
GSE17041 Statistical identification of gene association by CID in application of constructing ER regulatory network
GSE17137 NP-18 vs. NP-18AR transcriptional profile upon treatment with TK/GCV
GSE18229 Phenotypic and Molecular Characterization of the Claudin-low Intrinsic Subtype of Breast Cancer
GSE19775 Adrenocortical Carcinoma Gene Expression Profiling [Agilent]
GSE19776 Adrenocortical Carcinoma Gene Expression Profiling
GSE20026 Profiling of THP-1 cells infected with H37Rv (wild-type), ∆E (deletion mutant of PknE), C∆E (complemented ∆E)
GSE20624 Breast Carcinomas arising at a Young Age: A Unique Biology or a Surrogate for Aggressive Intrinsic Subtypes.
GSE22049 MicroRNA-30c inhibits Human Breast Tumor Chemotherapy Resistance by regulating TWF1 and IL-11: Patient DataSet
GSE24124 The inferred mechanisms for prognostic features of signal transducer and activator of transcription 3 in an ER(+) breast cancer model system
GSE26338 Genomic analysis identifies unique signatures predictive of brain, lung, and liver relapse
GSE29581 Lysyl oxidase-like 2 (LOXL2) a new regulator of cell polarity required for metastatic dissemination of basal-like breast carcinomas
GSE32641 Major functional transcriptome of an inferred center regulator of an ER(-) breast cancer model system
GSE33437 NDRG1 siRNA and overexpression in breast cell lines
GSE33439 Global gene expression analysis reveals a link between NDRG1 and vesicle transport.
GSE33570 Human gastric cancer cell MKN45: MKN45-GFP control vs. highly metastatic sublines
GSE34452 A Multi-loop, Double-cube Microarray Design Applied to Prostate Cancer Cell Lines with Variable Sensitivity to Histone Deacetylase Inhibitors
GSE35629 Vimentin DNA Methylation Predicts Survival in Breast Cancer
GSE36889 Micro-scale genomic copy number aberrations as another means of mutagenesis in breast cancer
GSE39200 The NS1 protein of influenza A virus suppresses interferon-regulated activation of antigen-presentation and immune-proteasome pathways
GSE39202 NS1 protein of influenza A virus and interferon
GSE45848 Gene expressioin signatures at basal level in human lymphoblastoid cell lines with different ataxia telangiectasia-mutated (ATM) genotypes
GSE45850 Gene expression signatures but not cell cycle checkpoint functions distinguish AT carriers from normal individuals and AT patients
GSE53371 Neuroblastoma: MYCN normal vs. MYCN amplified
GSE69134 Genome expression profiling identifies host-directed antimicrobial drugs against respiratory infection by nontypable Haemophilus influenzae
GSE107109 Asparagine availability governs metastasis in a model of breast cancer
GSE206320 Human umbilical vein endothelial cells: Control vs. Uninfected Groups
Relations Alternative to
GPL7264
Data table header descriptions ID Agilent feature number
COL Column
ROW Row
NAME Name
SPOT_ID Spot identifier
CONTROL_TYPE Control type
REFSEQ RefSeqAccession
GB_ACC GenBankAccession
GENE Entrez Gene ID
GENE_SYMBOL Gene Symbol
GENE_NAME Gene Name
UNIGENE_ID UnigeneID
ENSEMBL_ID EnsemblID
TIGR_ID TIGRID
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
CYTOBAND Cytoband
DESCRIPTION Description
GO_ID GoIDs
SEQUENCE
Data table ID COL ROW NAME SPOT_ID CONTROL_TYPE REFSEQ GB_ACC GENE GENE_SYMBOL GENE_NAME UNIGENE_ID ENSEMBL_ID TIGR_ID ACCESSION_STRING CHROMOSOMAL_LOCATION CYTOBAND DESCRIPTION GO_ID SEQUENCE 1
105
215
BrightCorner
BrightCorner
pos
2
105
214
NegativeControl
NegativeControl
neg
3
105
213
NM_021996
A_23_P146576
FALSE
NM_021996
NM_021996 26301 GBGT1
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1
Hs.495419
ENST00000372043
THC2423269
ref|NM_021996|gb|CR622726|gb|AK074639|ens|ENST00000372043
chr9:133058749-133058690
hs|9q34.2
Homo sapiens globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (GBGT1), mRNA [NM_021996]
GO:0005975(carbohydrate metabolism)|GO:0016020(membrane)|GO:0016021(integral to membrane)|GO:0016758(transferase activity, transferring hexosyl groups)|GO:0030145(manganese ion binding)|GO:0046872(metal ion binding)
GGTATATGAGTTTACTAGGGGCTGCCACATGGCCATCCTGGCGGACAAGGCCAATGGCAT
4
105
212
A_23_P125016
A_23_P125016
FALSE
CAAGCACAAGAGGAAGAAGGTCAAGCTAGCTGTCCTGAAATACTACAAGGTTGACGAGAA
5
105
211
NM_213622
A_23_P28555
FALSE
NM_213622
NM_213622 10617 STAMBP
STAM binding protein
Hs.469018
THC2234524
ref|NM_213622|ref|NM_006463|ref|NM_201647|gb|CR598843
chr2:74001415-74001474
hs|2p13.1
Homo sapiens STAM binding protein (STAMBP), transcript variant 3, mRNA [NM_213622]
GO:0004221(ubiquitin thiolesterase activity)|GO:0005515(protein binding)|GO:0005634(nucleus)|GO:0006512(ubiquitin cycle)|GO:0007259(JAK-STAT cascade)|GO:0008237(metallopeptidase activity)|GO:0008270(zinc ion binding)|GO:0008284(positive regulation of cell proliferation)|GO:0016020(membrane)|GO:0046872(metal ion binding)
TGTTTATATTTACCTCTGGGCTCAATAAGGGCATCTGTGCAGAAATTTGGAAGCCATTTA
6
105
210
E1A_r60_n9
E1A_r60_n9
pos
7
105
209
Pro25G
Pro25G
pos
8
105
208
NM_006256
A_23_P23227
FALSE
NM_006256
NM_006256 5586 PKN2
protein kinase N2
Hs.440833
ENST00000370521
THC2247360
ref|NM_006256|gb|BC062620|ens|ENST00000370521|ens|ENST00000361145
chr1:89011189-89011248
hs|1p22.2
Homo sapiens protein kinase N2 (PKN2), mRNA [NM_006256]
GO:0000166(nucleotide binding)|GO:0004674(protein serine/threonine kinase activity)|GO:0005524(ATP binding)|GO:0005622(intracellular)|GO:0006468(protein amino acid phosphorylation)|GO:0007165(signal transduction)|GO:0016740(transferase activity)
AAGACCTCTTAAAAATAGCAACCCTTCATTTGCTCTCTGTGCCACCAATAGCTTCTGAGT
9
105
207
NM_152493
A_23_P137543
FALSE
NM_152493
NM_152493 149076 FLJ25476
FLJ25476 protein
Hs.524248
ENST00000373428
THC2258236
ref|NM_152493|ens|ENST00000373428|ens|ENST00000291413|gb|BC071632
chr1:33435078-33435137
hs|1p35.1
Homo sapiens FLJ25476 protein (FLJ25476), mRNA [NM_152493]
GO:0003676(nucleic acid binding)|GO:0005622(intracellular)|GO:0005634(nucleus)|GO:0008270(zinc ion binding)|GO:0046872(metal ion binding)
ACTCCCTGTAAATACGCTGTTATACATACTGTTAACACCCCTTTGCTTTTTCTATGGGAC
10
105
206
NM_170741
A_23_P501193
FALSE
NM_170741
NM_170741 3773 KCNJ16
potassium inwardly-rectifying channel, subfamily J, member 16
Hs.463985
ENST00000283936
THC2236782
ref|NM_170741|ref|NM_170742|ref|NM_018658|ens|ENST00000283936
chr17:65643118-65643177
hs|17q24.3
Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 16 (KCNJ16), transcript variant 2, mRNA [NM_170741]
GO:0005242(inward rectifier potassium channel activity)|GO:0005244(voltage-gated ion channel activity)|GO:0005267(potassium channel activity)|GO:0006811(ion transport)|GO:0006813(potassium ion transport)|GO:0016020(membrane)|GO:0016021(integral to membrane)|GO:0030955(potassium ion binding)
TACCGCTGATGTTTGCCTTGTCAATATCAGAATAGGGGCATCAGTGTCCCGTGAAATACA
11
105
205
NM_005121
A_23_P27247
FALSE
NM_005121
NM_005121 9969 THRAP1
thyroid hormone receptor associated protein 1
Hs.282678
ENST00000262436
THC2236895
ref|NM_005121|ens|ENST00000262436|gb|AF117754|gb|AB011165
chr17:57383086-57383027
hs|17q23.2
Homo sapiens thyroid hormone receptor associated protein 1 (THRAP1), mRNA [NM_005121]
GO:0000119(mediator complex)|GO:0004872(receptor activity)|GO:0005634(nucleus)|GO:0006350(transcription)|GO:0006355(regulation of transcription, DNA-dependent)|GO:0006367(transcription initiation from RNA polymerase II promoter)|GO:0016455(RNA polymerase II transcription mediator activity)|GO:0030374(ligand-dependent nuclear receptor transcription coactivator activity)|GO:0030521(androgen receptor signaling pathway)|GO:0042809(vitamin D receptor binding)|GO:0045944(positive regulation of transcription from RNA polymerase II promoter)|GO:0046966(thyroid hormone receptor binding)
TTCTTCAGCAACCATTGGCCCTTGGTTACTTTGTATCAACTGCCAAAGCAGGTCCATTAC
12
105
204
NM_145260
A_23_P323270
FALSE
NM_145260
NM_145260 130497 OSR1
odd-skipped related 1 (Drosophila)
Hs.123933
ENST00000381236
THC2237979
ref|NM_145260|ens|ENST00000381236|ens|ENST00000272223|gb|CR602655
chr2:19473003-19472944
hs|2p24.1
Homo sapiens odd-skipped related 1 (Drosophila) (OSR1), mRNA [NM_145260]
GO:0003676(nucleic acid binding)|GO:0005622(intracellular)|GO:0005634(nucleus)|GO:0008270(zinc ion binding)|GO:0046872(metal ion binding)
GAGGGAGCAGCCAGCCAAGAGCCGGGCGTTATATTGCGATTGGCACTTTATGCTGACCAT
13
105
203
NM_017419
A_23_P258433
FALSE
NM_017419
NM_017419 51802 ACCN5
amiloride-sensitive cation channel 5, intestinal
Hs.381349
ENST00000264432
NP852946
ref|NM_017419|ens|ENST00000264432|gb|AJ252011|thc|NP852946
chr4:157108800-157108741
hs|4q32.1
Homo sapiens amiloride-sensitive cation channel 5, intestinal (ACCN5), mRNA [NM_017419]
ATCTTGGTGGTCAGCTGGGTCTATTTTGTGGGGCCAGTCTGATCACGATCATAGAAATTA
14
105
202
Pro25G
Pro25G
pos
15
105
201
NM_016085
A_23_P28649
FALSE
NM_016085
NM_016085 51374 C2orf28
chromosome 2 open reading frame 28
Hs.9527
ENST00000380171
THC2399733
ref|NM_016085|ref|NM_080592|gb|BC035850|ens|ENST00000380171
chr2:27351064-27351123
hs|2p23.3
Homo sapiens chromosome 2 open reading frame 28 (C2orf28), transcript variant 1, mRNA [NM_016085]
GO:0005554(molecular function unknown)|GO:0008372(cellular component unknown)|GO:0016020(membrane)|GO:0016021(integral to membrane)
TTGTGTACCTGATGGTCCAGGTCTTTTGCAGTGTGTTTGTGCTGATGGTTTCCATGGATA
16
105
200
A_23_P96529
A_23_P96529
FALSE
chrX:108422156-108422097
hs|Xq22.3
ATAGATGTGAACCTTATGGAAGAGTAGAGAGCCACCTCCAAGTTTAGTCATTCCAAAGTA
17
105
199
XM_084868
A_23_P2322
FALSE
XM_084868
XM_084868 144448 TSPAN19
tetraspanin 19
Hs.156962
THC2304129
ref|XM_084868|ref|XM_940476|thc|THC2304129|thc|THC2303899
chr12:83913732-83912189
hs|12q21.31
PREDICTED: Homo sapiens tetraspanin 19 (TSPAN19), mRNA [XM_084868]
GO:0016021(integral to membrane)
GATGAGCCACTGAATGCAACTTACCTTGAGGGTTGTGAAAATAAAATCAGTGCATGGTAT
18
105
198
NM_005060
A_23_P372910
FALSE
NM_005060
NM_005060 6097 RORC
RAR-related orphan receptor C
Hs.256022
ENST00000318247
NP1139689
ref|NM_005060|ref|NM_001001523|ens|ENST00000318247|ens|ENST00000318208
chr1:148598791-148598551
hs|1q21.3
Homo sapiens RAR-related orphan receptor C (RORC), transcript variant 1, mRNA [NM_005060]
GO:0003700(transcription factor activity)|GO:0003707(steroid hormone receptor activity)|GO:0005634(nucleus)|GO:0006350(transcription)|GO:0006355(regulation of transcription, DNA-dependent)|GO:0008270(zinc ion binding)|GO:0043565(sequence-specific DNA binding)|GO:0046872(metal ion binding)
TTGGGCTGCAGCGAGCTCATCAGCTCCATCTTTGACTTCTCCCACTCCCTAAGTGCCTTG
19
105
197
NA
NA
ignore
20
105
196
NM_144674
A_23_P343357
FALSE
NM_144674
NM_144674 146279 FLJ32871
hypothetical protein FLJ32871
Hs.143519
ENST00000283025
THC2413907
ref|NM_144674|ens|ENST00000283025|gb|AK057433|thc|THC2413907
chr16:10690642-10683467
hs|16p13.13
Homo sapiens hypothetical protein FLJ32871 (FLJ32871), mRNA [NM_144674]
GO:0000226(microtubule cytoskeleton organization and biogenesis)|GO:0005874(microtubule)
AAATTAGCTCAAAGAATTGATATCCAGATGCGGGATAACCGGGATGCTCAGCACGTGCTG
22575 11219 Kbytes .Supplementary file Size Download File type/resource GPL887_old_annotations.txt.gz
3.3 Mb
(ftp) (http) TXT
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