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Status |
Public on Jan 20, 2023 |
Title |
[Celegans] Affymetrix C. elegans Genome Array [CDF: Celegans_Ce_ENSG version 21] |
Technology type |
in situ oligonucleotide |
Distribution |
custom-commercial |
Organism |
Caenorhabditis elegans |
Manufacturer |
Affymetrix |
Manufacture protocol |
see manufacturer's web site
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Description |
This is identical to GPL200 but a custom CDF environment was used to extract data [Brainarray Version 21, Celegans_Ce_ENSG]. CDF can be downloaded from the Brainarray website: http://mbni.org/customcdf/21.0.0/ensg.download/Celegans_Ce_ENSG_21.0.0.zip
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Submission date |
Mar 30, 2022 |
Last update date |
Jan 22, 2023 |
Contact name |
Constantinos Deltas |
E-mail(s) |
Deltas@ucy.ac.cy
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Organization name |
University of Cyprus
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Department |
Biology
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Lab |
biobank.cy Center of Excellence
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Street address |
Palaios dromos Lefkosias Lemesou No.215/6
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City |
Nicosia |
State/province |
Aglantzia |
ZIP/Postal code |
2029 |
Country |
Cyprus |
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Samples (6) |
GSM5987572, GSM5987573, GSM5987574, GSM5987575, GSM5987576, GSM5987577 |
Series (1) |
GSE199807 |
Expression data from mid-aged decapping mutant C. elegans nematodes |
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Relations |
Alternative to |
GPL200 (Alternative CDF [official]) |
Data table header descriptions |
ID |
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ORF |
Gene Symbol WBcel235 assembly |
DESCRIPTION |
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SPOT_ID |
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Data table |
ID |
ORF |
DESCRIPTION |
SPOT_ID |
WBGene00000001_at |
aap-1 |
phosphoinositide kinase AdAPter subunit [Source:RefSeq peptide;Acc:NP_491522] |
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WBGene00000002_at |
aat-1 |
Amino Acid Transporter |
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WBGene00000003_at |
aat-2 |
Amino Acid Transporter |
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WBGene00000004_at |
aat-3 |
Amino Acid Transporter |
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WBGene00000005_at |
aat-4 |
Amino Acid Transporter |
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WBGene00000006_at |
aat-5 |
Amino Acid Transporter |
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WBGene00000007_at |
aat-6 |
Amino Acid Transporter |
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WBGene00000008_at |
aat-7 |
Amino Acid Transporter |
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WBGene00000009_at |
aat-8 |
Amino Acid Transporter |
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WBGene00000010_at |
aat-9 |
Amino Acid Transporter |
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WBGene00000012_at |
abf-1 |
Antibacterial factor-related peptide 1 |
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WBGene00000013_at |
abf-2 |
Antibacterial factor-related peptide 2 |
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WBGene00000014_at |
abf-3 |
AntiBacterial Factor related [Source:RefSeq peptide;Acc:NP_506950] |
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WBGene00000015_at |
abf-4 |
AntiBacterial Factor related [Source:RefSeq peptide;Acc:NP_507965] |
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WBGene00000016_at |
abf-5 |
AntiBacterial Factor related [Source:RefSeq peptide;Acc:NP_510136] |
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WBGene00000018_at |
abl-1 |
Tyrosine-protein kinase abl-1 [Source:UniProtKB/Swiss-Prot;Acc:P03949] |
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WBGene00000019_at |
abt-1 |
ABC Transporter family |
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WBGene00000020_at |
abt-2 |
ABC Transporter family |
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WBGene00000021_at |
abt-3 |
NA |
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WBGene00000022_at |
abt-4 |
ABC Transporter family |
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Total number of rows: 17397
Table truncated, full table size 1084 Kbytes.
Supplementary file |
Size |
Download |
File type/resource |
GPL32098_Celegans_Ce_ENSG.cdf.gz |
5.1 Mb |
(ftp)(http) |
CDF |
GPL32098_Celegans_Ce_ENSG_desc_annotation.txt.gz |
227.7 Kb |
(ftp)(http) |
TXT |
GPL32098_Celegans_Ce_ENSG_mapping.txt.gz |
1.6 Mb |
(ftp)(http) |
TXT |
GPL32098_Celegans_Ce_ENSG_probe.tab.gz |
2.7 Mb |
(ftp)(http) |
TAB |
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