GEO help: Mouse over screen elements for information.
Status
Public on Mar 11, 2014
Title
Illumina HumanRef-8 v3.0 expression beadchip (controls added)
Technology type
oligonucleotide beads
Distribution
commercial
Organism
Homo sapiens
Manufacturer
Illumina Inc.
Manufacture protocol
see manufacturer's website
Description
**This platform records include the probes in the original GPL6883 platform and 5 additional ILMN_Control probes. The HumanRef-8 v3.0 Expression BeadChip features up-to-date content derived from the National Center for Biotechnology Information Reference Sequence (NCBI RefSeq) database (Build 36.2, Release 22). Please use the GEO Data Submission Report Plug-in v1.0 for Gene Expression which may be downloaded from https://icom.illumina.com/icom/software.ilmn?id=234 to format the normalized and raw data. These should be submitted as part of a GEOarchive. Instructions for assembling a GEOarchive may be found at http://www.ncbi.nlm.nih.gov/projects/geo/info/spreadsheet.html
Submission date
Mar 11, 2014
Last update date
Mar 11, 2014
Contact name
GEO admin
E-mail(s)
geo@ncbi.nlm.nih.gov
Organization name
NCBI/NLM/NIH
Street address
9000 Rockville Pike
City
Bethesda
State/province
MD
ZIP/Postal code
20892
Country
USA
Samples (174)
GSM1346069 , GSM1346070 , GSM1346071 , GSM1346072 , GSM1346073 , GSM1346074
GSM1346075 ,
GSM1346076 ,
GSM1346077 ,
GSM1346078 ,
GSM1346079 ,
GSM1346080 ,
GSM1346081 ,
GSM1346082 ,
GSM1346083 ,
GSM1346084 ,
GSM1567506 ,
GSM1567507 ,
GSM2333240 ,
GSM2333241 ,
GSM2333242 ,
GSM2333243 ,
GSM2333244 ,
GSM2333245 ,
GSM2333246 ,
GSM2333247 ,
GSM2333248 ,
GSM2333249 ,
GSM2333250 ,
GSM2333251 ,
GSM2481249 ,
GSM2481250 ,
GSM2481251 ,
GSM2481252 ,
GSM2481253 ,
GSM2481254 ,
GSM2481255 ,
GSM2481256 ,
GSM2692423 ,
GSM2692424 ,
GSM2692425 ,
GSM2692426 ,
GSM2692427 ,
GSM2692428 ,
GSM2692429 ,
GSM2692430 ,
GSM2692431 ,
GSM2692432 ,
GSM2692433 ,
GSM2692434 ,
GSM2692435 ,
GSM2692436 ,
GSM2692437 ,
GSM2692438 ,
GSM2692439 ,
GSM2692440 ,
GSM2692441 ,
GSM2692442 ,
GSM2692443 ,
GSM2692444 ,
GSM2692445 ,
GSM2692446 ,
GSM2692447 ,
GSM2692448 ,
GSM2692449 ,
GSM2692450 ,
GSM2692451 ,
GSM2692452 ,
GSM2692453 ,
GSM2692454 ,
GSM2692455 ,
GSM2692456 ,
GSM2692457 ,
GSM2692458 ,
GSM2692459 ,
GSM2692460 ,
GSM2692461 ,
GSM2692462 ,
GSM2692463 ,
GSM2692464 ,
GSM2692465 ,
GSM2692466 ,
GSM2692467 ,
GSM2692468 ,
GSM2692469 ,
GSM2692470 ,
GSM2692471 ,
GSM2692472 ,
GSM2692473 ,
GSM2692474 ,
GSM2692475 ,
GSM2692476 ,
GSM2692477 ,
GSM2692478 ,
GSM2692479 ,
GSM2692480 ,
GSM2692481 ,
GSM2692482 ,
GSM2692483 ,
GSM2692484 ,
GSM2692485 ,
GSM2692486 ,
GSM2692487 ,
GSM2692488 ,
GSM2692489 ,
GSM2692490 ,
GSM2692491 ,
GSM2692492 ,
GSM2692493 ,
GSM2692494 ,
GSM2692495 ,
GSM2692496 ,
GSM2692497 ,
GSM2692498 ,
GSM2692499 ,
GSM2692500 ,
GSM2692501 ,
GSM2692502 ,
GSM2692503 ,
GSM2692504 ,
GSM2692505 ,
GSM2692506 ,
GSM2692507 ,
GSM2692508 ,
GSM2692509 ,
GSM2692510 ,
GSM2692511 ,
GSM2692512 ,
GSM2692513 ,
GSM2692514 ,
GSM2692515 ,
GSM2692516 ,
GSM2692517 ,
GSM2692518 ,
GSM2692519 ,
GSM2692520 ,
GSM2692521 ,
GSM2692522 ,
GSM2692523 ,
GSM2692524 ,
GSM2692525 ,
GSM2692526 ,
GSM2692527 ,
GSM2692528 ,
GSM2692529 ,
GSM2692530 ,
GSM2692531 ,
GSM2692532 ,
GSM2692533 ,
GSM2692534 ,
GSM2692535 ,
GSM2692536 ,
GSM2692537 ,
GSM2692538 ,
GSM2692539 ,
GSM2692540 ,
GSM2692541 ,
GSM2692542 ,
GSM2692543 ,
GSM2692544 ,
GSM2692545 ,
GSM2692546 ,
GSM2692547 ,
GSM2692548 ,
GSM2692549 ,
GSM2692550 ,
GSM2692551 ,
GSM2692552 ,
GSM2692553 ,
GSM2692554 ,
GSM2692555 ,
GSM2692556 ,
GSM2692557 ,
GSM2692558
Series (9)
GSE55786
Gene expression of T47D-MTVL human breast cancer cells upon H1.4 knock-down or overexpression
GSE64269
IRF4, a master transcription factor, regulates genes involved in BCR signaling, antigen processing and presentation, and GC development [expression array]
GSE64270
IRF4, a master transcription factor, regulates genes involved in BCR signaling, antigen processing and presentation, and GC development
GSE87526
Global expression analysis of the trabecular meshwork, cornea, sclera and trabecular meshwork-derived mesenchymal stem cells (TM-MSC)
GSE94706
iPSCs from patients with NBS as a model uncovering disease mechanisms and a screening platform for anti-oxidants modifying genomic stability [fibroblasts]
GSE94708
iPSCs from patients with NBS as a model uncovering disease mechanisms and a screening platform for anti-oxidants modifying genomic stability
GSE100748
Mesenchymal Stromal Cells Derived from Human Embryonic Stem Cells, Fetal Limb and Bone Marrow Share a Common Phenotype but are Transcriptionally and Biologically Different [I]
GSE100749
Mesenchymal Stromal Cells Derived from Human Embryonic Stem Cells, Fetal Limb and Bone Marrow Share a Common Phenotype but are Transcriptionally and Biologically Different [II]
GSE100752
Mesenchymal Stromal Cells Derived from Human Embryonic Stem Cells, Fetal Limb and Bone Marrow Share a Common Phenotype but are Transcriptionally and Biologically Different
Relations
Alternative to
GPL6883 (official)
Data table header descriptions
ID
Unique identifier for the probe (across all products and species)
Species
Source
Transcript sequence source name
Search_Key
Internal id useful for custom design array
Transcript
Internal transcript id
ILMN_Gene
Internal gene symbol
Source_Reference_ID
Id in the source database
RefSeq_ID
Refseq id
Entrez_Gene_ID
Entrez gene id
GI
Genbank id
Accession
Genbank accession number
Symbol
Gene symbol from the source database
Protein_Product
Genbank protein accession number
Array_Address_Id
Decoder id
Probe_Type
Information about what this probe is targeting
Probe_Start
Position of the probe relative to the 5' of the source transcript sequence
SEQUENCE
Probe sequence
Chromosome
Chromosome
Probe_Chr_Orientation
Orientation on the NCBI genome built
Probe_Coordinates
genomic position of the probe on the NCBI genome build 36 version 3
Cytoband
Definition
Gene description from the source
Ontology_Component
Cellular component annotations from Gene Ontology project
Ontology_Process
Biological process annotations from Gene Ontology project
Ontology_Function
Molecular function annotations from Gene Ontology project
Synonyms
Gene symbol synonyms from Refseq
GB_ACC
Data table
ID
Species
Source
Search_Key
Transcript
ILMN_Gene
Source_Reference_ID
RefSeq_ID
Entrez_Gene_ID
GI
Accession
Symbol
Protein_Product
Array_Address_Id
Probe_Type
Probe_Start
SEQUENCE
Chromosome
Probe_Chr_Orientation
Probe_Coordinates
Cytoband
Definition
Ontology_Component
Ontology_Process
Ontology_Function
Synonyms
GB_ACC
ILMN_1722532
Homo sapiens
RefSeq
ILMN_25544
ILMN_25544
JMJD1A
NM_018433.3
NM_018433.3
55818
46358420
NM_018433.3
JMJD1A
NP_060903.2
1240504
S
4359
CCAGGCTGTAAAAGCAAAACCTCGTATCAGCTCTGGAACAATACCTGCAG
2
+
86572991-86573040
2p11.2e
Homo sapiens jumonji domain containing 1A (JMJD1A), mRNA.
nucleus [goid 5634] [evidence IEA]
chromatin modification [goid 16568] [evidence IEA]; transcription [goid 6350] [evidence IEA]; regulation of transcription, DNA-dependent [goid 6355] [evidence IEA]
oxidoreductase activity [goid 16491] [evidence IEA]; oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [goid 16702] [evidence IEA]; zinc ion binding [goid 8270] [evidence IEA]; metal ion binding [goid 46872] [evidence IEA]; iron ion binding [goid 5506] [evidence IEA]
JHMD2A; JMJD1; TSGA; KIAA0742; DKFZp686A24246; DKFZp686P07111
NM_018433.3
ILMN_1708805
Homo sapiens
RefSeq
ILMN_10519
ILMN_10519
NCOA3
NM_006534.2
NM_006534.2
8202
32307123
NM_006534.2
NCOA3
NP_006525.2
2760390
A
7834
CCACATGAAATGACTTATGGGGGATGGTGAGCTGTGACTGCTTTGCTGAC
20
+
45718934-45718983
20q13.12c
Homo sapiens nuclear receptor coactivator 3 (NCOA3), transcript variant 2, mRNA.
nucleus [goid 5634] [pmid 9267036] [evidence NAS]
positive regulation of transcription, DNA-dependent [goid 45893] [pmid 15572661] [evidence NAS]; androgen receptor signaling pathway [goid 30521] [pmid 15572661] [evidence NAS]; signal transduction [goid 7165] [evidence IEA]
acyltransferase activity [goid 8415] [evidence IEA]; thyroid hormone receptor binding [goid 46966] [pmid 9346901] [evidence NAS]; transferase activity [goid 16740] [evidence IEA]; transcription coactivator activity [goid 3713] [pmid 15572661] [evidence NAS]; androgen receptor binding [goid 50681] [pmid 15572661] [evidence NAS]; histone acetyltransferase activity [goid 4402] [pmid 9267036] [evidence TAS]; signal transducer activity [goid 4871] [evidence IEA]; transcription regulator activity [goid 30528] [evidence IEA]; protein binding [goid 5515] [pmid 15698540] [evidence IPI]
CAGH16; TNRC14; pCIP; ACTR; MGC141848; CTG26; AIB-1; TRAM-1; TNRC16; AIB1; SRC3; SRC-1; RAC3
NM_006534.2
ILMN_1672526
Homo sapiens
RefSeq
ILMN_17234
ILMN_17234
LOC389834
NM_001013655.1
NM_001013655.1
389834
61966764
NM_001013655.1
LOC389834
NP_001013677.1
1740239
S
3938
CCATTGGTTCTGTTTGGCATAACCCTATTAAATGGTGCGCAGAGCTGAAT
4
-
51062-51111
Homo sapiens hypothetical gene supported by AK123403 (LOC389834), mRNA.
NM_001013655.1
ILMN_1703284
Homo sapiens
RefSeq
ILMN_502
ILMN_502
SPIRE2
NM_032451.1
NM_032451.1
84501
55749599
NM_032451.1
SPIRE2
NP_115827.1
6040014
S
3080
ACATGTGTCCTGCCTCTCCTGGCCCTACCACATTCTGGTGCTGTCCTCAC
16
+
88465064-88465113
16q24.3b
Homo sapiens spire homolog 2 (Drosophila) (SPIRE2), mRNA.
zinc ion binding [goid 8270] [evidence IEA]
MGC117166; Spir-2
NM_032451.1
ILMN_2185604
Homo sapiens
RefSeq
ILMN_19244
ILMN_19244
C17ORF77
NM_152460.2
NM_152460.2
146723
48255961
NM_152460.2
C17orf77
NP_689673.2
6550343
S
2372
CTGCTCCAGTGAAGGGTGCACCAAAATCTCAGAAGTCACTGCTAAAGACC
17
+
70101790-70101839
17q25.1b
Homo sapiens chromosome 17 open reading frame 77 (C17orf77), mRNA.
FLJ31882
NM_152460.2
ILMN_1785107
Homo sapiens
RefSeq
ILMN_1567
ILMN_1567
NXT2
NM_018698.3
NM_018698.3
55916
21361723
NM_018698.3
NXT2
NP_061168.2
5270307
S
2605
ATGGCTGGAACTACTCGTATAAGGACTAGACTGTATTTTTGACATGCTCC
X
+
108674482-108674531
Xq22.3c
Homo sapiens nuclear transport factor 2-like export factor 2 (NXT2), mRNA.
intracellular [goid 5622] [evidence IEA]; nucleus [goid 5634] [evidence IEA]
mRNA processing [goid 6397] [evidence IEA]; transport [goid 6810] [evidence IEA]; protein transport [goid 15031] [evidence IEA]
transporter activity [goid 5215] [evidence IEA]
P15-2
NM_018698.3
ILMN_1689711
Homo sapiens
RefSeq
ILMN_2520
ILMN_2520
CHKB
NM_152253.1
NM_152253.1
1120
23238260
NM_152253.1
CHKB
NP_689466.1
5810382
I
953
CTAAATAAAAATAGACCAACGCTAAAGCCTGTGCTCCAGAGCCTCCAGGC
22q13.33b
Homo sapiens choline kinase beta (CHKB), transcript variant 2, mRNA.
transferase activity [goid 16740] [evidence IEA]; ethanolamine kinase activity [goid 4305] [evidence IEA]
CHKL; CHETK
NM_152253.1
ILMN_1782551
Homo sapiens
RefSeq
ILMN_17249
ILMN_17249
E2F5
NM_001951.2
NM_001951.2
1875
12669916
NM_001951.2
E2F5
NP_001942.1
6650196
S
957
CTTCTGACGTGTTTCCTCTCTTAAGGCTTTCTCCTACCCCGGCAGATGAC
8
+
86311683-86311691:86313240-86313280
8q21.2b
Homo sapiens E2F transcription factor 5, p130-binding (E2F5), mRNA.
transcription factor complex [goid 5667] [evidence IEA]; nucleus [goid 5634] [evidence IEA]
transcription [goid 6350] [evidence IEA]; regulation of transcription, DNA-dependent [goid 6355] [evidence IEA]
protein binding [goid 5515] [pmid 7760804] [evidence TAS]; transcription factor activity [goid 3700] [pmid 7892279] [evidence NAS]
E2F-5
NM_001951.2
ILMN_1656040
Homo sapiens
RefSeq
ILMN_6765
ILMN_6765
NTN2L
NM_006181.1
NM_006181.1
4917
5453809
NM_006181.1
NTN2L
NP_006172.1
6400669
S
1571
AAAGAAGTTCTGCAAGAAGGACTATGCGGTGCAGGTGGCGGTGGGTGCGC
16
+
2463480-2463505:2463758-2463781
16p13.3d
Homo sapiens netrin 2-like (chicken) (NTN2L), mRNA.
extracellular matrix (sensu Metazoa) [goid 5578] [evidence IEA]
axon guidance [goid 7411] [pmid 9143507] [evidence NAS]
structural molecule activity [goid 5198] [evidence IEA]
NM_006181.1
ILMN_1715540
Homo sapiens
RefSeq
ILMN_2384
ILMN_2384
TRAIP
NM_005879.2
NM_005879.2
10293
40807468
NM_005879.2
TRAIP
NP_005870.2
7380347
S
1609
TCGGGACCAGCCTGAGGTGTAAGGGCAGACAAACAGGTGAGGGTGAGTGT
3
-
49841397-49841446
3p21.31c
Homo sapiens TRAF interacting protein (TRAIP), mRNA.
cell proliferation [goid 8283] [pmid 9104814] [evidence TAS]; induction of apoptosis [goid 6917] [pmid 9104814] [evidence TAS]; signal transduction [goid 7165] [pmid 9104814] [evidence TAS]
metal ion binding [goid 46872] [evidence IEA]; zinc ion binding [goid 8270] [evidence IEA]; protein binding [goid 5515] [evidence IEA]
TRIP; RNF206
NM_005879.2
ILMN_2371280
Homo sapiens
RefSeq
ILMN_21047
ILMN_21047
CSF3R
NM_172313.1
NM_172313.1
1441
27437044
NM_172313.1
CSF3R
NP_758519.1
6270114
A
2459
GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTT
1
-
36704305-36704354
1p34.3d
Homo sapiens colony stimulating factor 3 receptor (granulocyte) (CSF3R), transcript variant 4, mRNA.
integral to plasma membrane [goid 5887] [pmid 7542747] [evidence TAS]; membrane [goid 16020] [evidence IEA]
cell adhesion [goid 7155] [evidence IEA]; defense response [goid 6952] [pmid 7542747] [evidence TAS]; signal transduction [goid 7165] [pmid 1371413] [evidence NAS]
receptor activity [goid 4872] [pmid 7542747] [evidence TAS]; hematopoietin/interferon-class (D200-domain) cytokine receptor activity [goid 4896] [evidence IEA]; protein binding [goid 5515] [evidence IEA]
GCSFR; CD114
NM_172313.1
ILMN_1777550
Homo sapiens
RefSeq
ILMN_25863
ILMN_25863
ARL13A
NM_001012990.1
NM_001012990.1
392509
61175259
NM_001012990.1
ARL13A
NP_001013008.1
4730291
S
678
GCCAACTACCACCTACCTCGAGCATCTCAATCTCCAAGAATAACACAGGC
X
+
100129126-100129175
Xq22.1c
Homo sapiens ADP-ribosylation factor-like 13A (ARL13A), mRNA.
nucleotide binding [goid 166] [evidence IEA]; GTP binding [goid 5525] [evidence IEA]
dJ341D10.2; ARL13
NM_001012990.1
ILMN_1788239
Homo sapiens
RefSeq
ILMN_26806
ILMN_26806
AMDHD1
NM_152435.1
NM_152435.1
144193
22748912
NM_152435.1
AMDHD1
NP_689648.1
6520112
S
1951
GCTTCCCAGCAGCGTTCAAGACACATCATTTATACACAGGCACAGGGGCC
12
+
94886316-94886365
12q23.1a
Homo sapiens amidohydrolase domain containing 1 (AMDHD1), mRNA.
cytoplasm [goid 5737] [evidence IEA]
histidine catabolism to glutamate and formamide [goid 19556] [evidence IEA]
hydrolase activity [goid 16787] [evidence IEA]
MGC35366; HMFT1272
NM_152435.1
ILMN_2148679
Homo sapiens
RefSeq
ILMN_175112
ILMN_175112
SDHAP3
NR_003263.1
NR_003263.1
728609
118130933
NR_003263.1
SDHAP3
6350341
S
14386
CGGGGATGTTTAGCTTGAATTGCACCTCTCAGTCTGTGTGCCACGGCCCC
5p15.33d
Homo sapiens succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 3 (SDHAP3) on chromosome 5.
SDHAL; SDHACL
NR_003263.1
ILMN_1656792
Homo sapiens
RefSeq
ILMN_18604
ILMN_18604
FLYWCH1
NM_020912.1
NM_020912.1
84256
62953135
NM_020912.1
FLYWCH1
NP_065963.1
1450445
A
2380
CTCCCCACCACGGCCCAGCAGGAGGACCCAGAAAAGATTCAAGTTCAGCT
16
+
2928428-2928458:2930034-2930052
16p13.3d
Homo sapiens FLYWCH-type zinc finger 1 (FLYWCH1), transcript variant 2, mRNA.
NM_020912.1
ILMN_1803590
Homo sapiens
RefSeq
ILMN_139272
ILMN_139272
PSRC2
NM_144982.3
NM_144982.3
196441
34787414
NM_144982.3
PSRC2
NP_659419.2
3940451
S
7047
CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGA
12
-
70290245-70290294
12q21.1a
Homo sapiens proline/serine-rich coiled-coil 2 (PSRC2), mRNA.
nucleus [goid 5634] [evidence IEA]
RNA processing [goid 6396] [evidence IEA]
binding [goid 5488] [evidence IEA]
MGC90200; KIAA0546; MGC23401; DKFZp686A0722
NM_144982.3
ILMN_1730765
Homo sapiens
RefSeq
ILMN_15436
ILMN_15436
DUSP22
NM_020185.3
NM_020185.3
56940
34147625
NM_020185.3
DUSP22
NP_064570.1
610072
I
560
GCCAGGCCTATGTTGGAGGGAGTTAAATACCTGTGCATCCCAGCAGCGGA
6
+
256945-256962:280114-280145
6p25.3b
Homo sapiens dual specificity phosphatase 22 (DUSP22), mRNA.
nucleus [goid 5634] [evidence IEA]; nucleus [goid 5634] [evidence IEA]
apoptosis [goid 6915] [pmid 9205128] [evidence TAS]; cell proliferation [goid 8283] [pmid 9205128] [evidence TAS]; inactivation of MAPK activity [goid 188] [pmid 9205128] [evidence TAS]; development [goid 7275] [pmid 9205128] [evidence TAS]; protein amino acid dephosphorylation [goid 6470] [pmid 9205128] [evidence TAS]; apoptosis [goid 6915] [pmid 9205128] [evidence TAS]; cell proliferation [goid 8283] [pmid 9205128] [evidence TAS]; inactivation of MAPK activity [goid 188] [pmid 9205128] [evidence TAS]; development [goid 7275] [pmid 9205128] [evidence TAS]; protein amino acid dephosphorylation [goid 6470] [pmid 9205128] [evidence TAS]
hydrolase activity [goid 16787] [evidence IEA]; protein tyrosine phosphatase activity [goid 4725] [evidence IEA]; protein tyrosine/serine/threonine phosphatase activity [goid 8138] [evidence IEA]; hydrolase activity [goid 16787] [evidence IEA]; protein tyrosine phosphatase activity [goid 4725] [evidence IEA]; protein tyrosine/serine/threonine phosphatase activity [goid 8138] [evidence IEA]
MKPX; VHX; JSP1; JKAP
NM_020185.3
ILMN_1671809
Homo sapiens
RefSeq
ILMN_15436
ILMN_15436
DUSP22
NM_020185.3
NM_020185.3
56940
34147625
NM_020185.3
DUSP22
NP_064570.1
3710626
A
1181
TTCCCCTTATCCCCACTGCTGTGGAGGTTTCTGTACCTCGCTTGGATGCC
6
+
296055-296104
6p25.3b
Homo sapiens dual specificity phosphatase 22 (DUSP22), mRNA.
nucleus [goid 5634] [evidence IEA]; nucleus [goid 5634] [evidence IEA]
apoptosis [goid 6915] [pmid 9205128] [evidence TAS]; cell proliferation [goid 8283] [pmid 9205128] [evidence TAS]; inactivation of MAPK activity [goid 188] [pmid 9205128] [evidence TAS]; development [goid 7275] [pmid 9205128] [evidence TAS]; protein amino acid dephosphorylation [goid 6470] [pmid 9205128] [evidence TAS]; apoptosis [goid 6915] [pmid 9205128] [evidence TAS]; cell proliferation [goid 8283] [pmid 9205128] [evidence TAS]; inactivation of MAPK activity [goid 188] [pmid 9205128] [evidence TAS]; development [goid 7275] [pmid 9205128] [evidence TAS]; protein amino acid dephosphorylation [goid 6470] [pmid 9205128] [evidence TAS]
hydrolase activity [goid 16787] [evidence IEA]; protein tyrosine phosphatase activity [goid 4725] [evidence IEA]; protein tyrosine/serine/threonine phosphatase activity [goid 8138] [evidence IEA]; hydrolase activity [goid 16787] [evidence IEA]; protein tyrosine phosphatase activity [goid 4725] [evidence IEA]; protein tyrosine/serine/threonine phosphatase activity [goid 8138] [evidence IEA]
MKPX; VHX; JSP1; JKAP
NM_020185.3
ILMN_1750625
Homo sapiens
RefSeq
ILMN_137331
ILMN_137331
RSPO4
NM_001029871.1
NM_001029871.1
343637
71274173
NM_001029871.1
RSPO4
NP_001025042.1
3870014
S
2804
ATATTACATTCCCGACCCCAAGAGAGCACCCACCCTCAGACCTGCCCTCC
20
-
887328-887377
20p13e
Homo sapiens R-spondin family, member 4 (RSPO4), mRNA.
electron transport [goid 6118] [evidence IEA]
electron transporter activity [goid 5489] [evidence IEA]; iron ion binding [goid 5506] [evidence IEA]
dJ824F16.3; C20orf182; FLJ16018
NM_001029871.1
ILMN_1689814
Homo sapiens
RefSeq
ILMN_11679
ILMN_11679
DUSP13
NM_016364.3
NM_016364.3
51207
56237017
NM_016364.3
DUSP13
NP_057448.3
6220279
I
9
AGAGTCCTGCCCCTGCACCCACTCCCCCATTCCCGGCCCCAGGCCATGCC
10
-
76529196-76529245
10q22.2c
Homo sapiens dual specificity phosphatase 13 (DUSP13), transcript variant 6, mRNA.
meiosis [goid 7126] [pmid 10585869] [evidence TAS]; protein amino acid dephosphorylation [goid 6470] [pmid 10585869] [evidence TAS]; spermatogenesis [goid 7283] [pmid 10585869] [evidence TAS]
hydrolase activity [goid 16787] [evidence IEA]; protein tyrosine phosphatase activity [goid 4725] [evidence IEA]; protein tyrosine/serine/threonine phosphatase activity [goid 8138] [pmid 10585869] [evidence TAS]
DUSP13A; TMDP; SKRP4; BEDP; MDSP; FLJ32450; DUSP13B
NM_016364.3
Total number of rows: 24531 Table truncated, full table size 16378 Kbytes .
Supplementary data files not provided