GEO help: Mouse over screen elements for information.
Status
Public on Mar 24, 2011
Title
LMB microarray 15K (Agilent format)
Technology type
spotted oligonucleotide
Distribution
custom-commercial
Organism
Micropterus salmoides Manufacturer
Agilent
Manufacture protocol
SurePrint G3 Gene Expression Microarrays
Contributor(s)
Denslow N Submission date
Feb 26, 2011
Last update date
Jul 08, 2014
Contact name
Christopher Joseph Martyniuk
E-mail(s)
CMARTYN@UFL.EDU Organization name
UF
Department
Physiological Sciences
Street address
CEHT Mowry Road
City
Gainesville
State/province
FL
ZIP/Postal code
32611
Country
USA
Samples (210)
GSM691485 , GSM691486 , GSM691487 , GSM691488 , GSM691489 , GSM691490
GSM691491 ,
GSM691492 ,
GSM691493 ,
GSM691494 ,
GSM691495 ,
GSM691496 ,
GSM691497 ,
GSM691498 ,
GSM691499 ,
GSM691500 ,
GSM691501 ,
GSM691502 ,
GSM691503 ,
GSM691504 ,
GSM697288 ,
GSM697289 ,
GSM697290 ,
GSM697291 ,
GSM697292 ,
GSM697293 ,
GSM697294 ,
GSM697295 ,
GSM697296 ,
GSM697297 ,
GSM697298 ,
GSM697299 ,
GSM815539 ,
GSM815540 ,
GSM815541 ,
GSM815542 ,
GSM815543 ,
GSM815544 ,
GSM815545 ,
GSM815546 ,
GSM815547 ,
GSM815548 ,
GSM815549 ,
GSM815550 ,
GSM815551 ,
GSM815552 ,
GSM815553 ,
GSM815554 ,
GSM815555 ,
GSM815556 ,
GSM815557 ,
GSM815558 ,
GSM815559 ,
GSM815560 ,
GSM815561 ,
GSM815562 ,
GSM815563 ,
GSM815564 ,
GSM815565 ,
GSM815566 ,
GSM815567 ,
GSM815568 ,
GSM815569 ,
GSM948864 ,
GSM948865 ,
GSM948866 ,
GSM948867 ,
GSM948868 ,
GSM948869 ,
GSM948870 ,
GSM948871 ,
GSM949343 ,
GSM949344 ,
GSM949345 ,
GSM949346 ,
GSM949347 ,
GSM949348 ,
GSM949349 ,
GSM949350 ,
GSM949351 ,
GSM949352 ,
GSM949353 ,
GSM949354 ,
GSM1154479 ,
GSM1154480 ,
GSM1154481 ,
GSM1154482 ,
GSM1154483 ,
GSM1154484 ,
GSM1154485 ,
GSM1154486 ,
GSM1154487 ,
GSM1154488 ,
GSM1154489 ,
GSM1154490 ,
GSM1154491 ,
GSM1154492 ,
GSM1154493 ,
GSM1154494 ,
GSM1281034 ,
GSM1281035 ,
GSM1281036 ,
GSM1281037 ,
GSM1281038 ,
GSM1281039 ,
GSM1281040 ,
GSM1281041 ,
GSM1281042 ,
GSM1281043 ,
GSM1281044 ,
GSM1281045 ,
GSM1281046 ,
GSM1281047 ,
GSM1281048 ,
GSM1281049 ,
GSM1386650 ,
GSM1386651 ,
GSM1386652 ,
GSM1386653 ,
GSM1386654 ,
GSM1386655 ,
GSM1386656 ,
GSM1386657 ,
GSM1386658 ,
GSM1386659 ,
GSM1386660 ,
GSM1386661 ,
GSM1386665 ,
GSM1386666 ,
GSM1386667 ,
GSM1386668 ,
GSM1386669 ,
GSM1386670 ,
GSM1386671 ,
GSM1386672 ,
GSM1386673 ,
GSM1386674 ,
GSM1386675 ,
GSM1386676 ,
GSM1386677 ,
GSM1386678 ,
GSM1386679 ,
GSM1386680 ,
GSM1386681 ,
GSM1386682 ,
GSM1386683 ,
GSM1386684 ,
GSM1386685 ,
GSM1386686 ,
GSM1386687 ,
GSM1386688 ,
GSM1386689 ,
GSM1386690 ,
GSM1386691 ,
GSM1386692 ,
GSM1386693 ,
GSM1386694 ,
GSM1386695 ,
GSM1386696 ,
GSM1386697 ,
GSM1386698 ,
GSM1386699 ,
GSM1386700 ,
GSM1386929 ,
GSM1386930 ,
GSM1386931 ,
GSM1386932 ,
GSM1386933 ,
GSM1386934 ,
GSM1386935 ,
GSM1386936 ,
GSM1386937 ,
GSM1386938 ,
GSM1386939 ,
GSM1386940 ,
GSM1386941 ,
GSM1386942 ,
GSM1386943 ,
GSM1386944 ,
GSM1386945 ,
GSM1386946 ,
GSM1386947 ,
GSM1386948 ,
GSM1386949 ,
GSM1386950 ,
GSM1386951 ,
GSM1386952 ,
GSM1414606 ,
GSM1414607 ,
GSM1414608 ,
GSM1414609 ,
GSM1414610 ,
GSM1414611 ,
GSM1414612 ,
GSM1414613 ,
GSM4226895 ,
GSM4226896 ,
GSM4226897 ,
GSM4226898 ,
GSM4226899 ,
GSM4226900 ,
GSM4226901 ,
GSM4226902 ,
GSM4226903 ,
GSM4226904 ,
GSM4226905 ,
GSM4226906 ,
GSM4226907 ,
GSM4226908 ,
GSM4226909 Series (13)
GSE27963 Sexually dimorphic transcriptomic responses in the largemouth bass to the neuroactive pesticide dieldrin
GSE28143 Dietary exposure of 17-alpha ethinylestradiol modulates physiological endpoints and gene signaling pathways in female largemouth bass (Micropterus salmoides)
GSE32930 Ovarian transcriptomics over a complete breeding cycle in wild Largemouth bass (Micropterus salmoides) characterizes pathways underlying oocyte maturation and atresia
GSE38738 High contaminant loads in Lake Apopka mesocosms affect the ovarian transcriptome in largemouth bass [April]
GSE38773 High contaminant loads in Lake Apopka mesocosms affect the ovarian transcriptome in largemouth bass [January]
GSE38774 High contaminant loads in Lake Apopka mesocosms affect the ovarian transcriptome in largemouth bass
GSE47675 Gene expression profiling in the largemouth bass ovary following sub-chronic dietary exposures to the organochlorine pesticides p,p’ DDE and methoxychlor
GSE53047 Gene networks and putative toxicity pathways induced by acute exposure to low dose cadmium in largemouth bass (Micropterus salmoides)
GSE57684 Assessing the Potential Ecological Impacts of Perfluorinated Chemicals (PFCs) in the liver and testis of male largemouth bass (Micropterus salmoides) in Minnesota Lakes
GSE59224 Gene signaling pathways in liver of largemouth bass by a sub-chronic dietary exposure to EE2
GSE142395 Transcriptome and physiological effects of toxaphene on the liver-gonad reproductive axis in male and female largemouth bass (Micropterus salmoides) [Liver]
GSE142396 Transcriptome and physiological effects of toxaphene on the liver-gonad reproductive axis in male and female largemouth bass (Micropterus salmoides) [Testis]
GSE142397 Transcriptome and physiological effects of toxaphene on the liver-gonad reproductive axis in male and female largemouth bass (Micropterus salmoides)
Data table header descriptions ID TargetID LMB specific
QueryDef LMB specific
GB_ACC SEQUENCE NR Accession NR Accession
NR E-Value NR E-Value
NR Def NR Def
NT Accession NT Accession
NT E-Value NT E-Value
NT Def NT Def
Human RefSeq closest human homolog
Human Gene closest human homolog
Zebrafish RefSeq closest zebrafish homolog
Zebrafish Gene closest zebrafish homolog
GeneTitle name of gene
GO: Biological Process GO: Cellular Component GO: Molecular Function
Data table ID TargetID QueryDef GB_ACC SEQUENCE NR Accession NR E-Value NR Def NT Accession NT E-Value NT Def Human RefSeq Human Gene Zebrafish RefSeq Zebrafish Gene GeneTitle GO: Biological Process GO: Cellular Component GO: Molecular Function UF_Msa_AD_200001
LMB_Add_89
LMB_Add_89
ACTCAGCTCCATCGAGGTTGTCCAGGGCTTTGGTGGCACCGTCCTTCACCTGAGTCAGGTAGAGATCGACAGCAGACCTGATTTGGTCCAGCTGGGAGGGTGCATCAGCCTGGAGGAAAGCGGCGTGAGAGCCGACAGCCAGAAGGGCAAGAGCGAGAGCCACGAATTTCATGATGG
AAU87042
2.04E-09
preproapolipoprotein A-I [Gadus morhua]
BT027273
6.42E-29
Gasterosteus aculeatus clone CFW228-F10 mRNA sequence
NP_061978
7148
NP_571203
30355
apolipoprotein A-I /
GO:0042157; lipoprotein metabolic process GO:0006869; lipid transport GO:0006810; transport GO:0009968; negative regulation of signal transduction GO:0006695; cholesterol biosynthetic process GO:0045045; secretory pathway GO:0008203; cholesterol metabolic process
GO:0005786; signal recognition particle, endoplasmic reticulum targeting GO:0005576; extracellular region GO:0005615; extracellular space
GO:0005319; lipid transporter activity GO:0017127; cholesterol transporter activity GO:0008289; lipid binding GO:0008035; high-density lipoprotein binding
UF_Msa_AD_200002
LMB_Add_88
LMB_Add_88
ACAAAGTCCCTTCAACAACCTGACTCCGTGCCTTGCTGATGGAGGAGATTTTGTAGAGGAAGGGGTCTTTTGATTGGGTGTTGTAGTAGTTGGTGGCGACGAGGAGGGCCTTCTGGAGGTCGGGGTCGTCCTTGTTGATGTTGGTCACACCTCCAACTCTGCGGCCCGCCAACACCTCCAGCGCCAGAACGCCGAGCAGAGAGACGAGCAGCAGCGTCTTCAGTCCCATCATGCACTCTGTCTGTGAGTTCTCGTCTGTTTGGTGTGAGGCCTCGATGCTCTGAAC
CAG05106
2.69E-05
unnamed protein product [Tetraodon nigroviridis]
CP000094
0.0196224
Pseudomonas fluorescens PfO-1, complete genome
NP_001314
1474
XP_001331927
792416
UF_Msa_AD_200003
LMB_Add_87
LMB_Add_87
ACATGCCGGCTAAGGAGGATCACCCATGGCGGAATAAGCTCAGGCTTCAGTCCCAAATCCACACCGAGCTCGGAGCGCAGCAGCCCCAGTCCTTTGGACAACAGTTCAGTTGAGACGATGTGTAAGCAGCTTGACCTGCTGAGAGGCCGCGTCCTGCCACTGCTCCATTGTATTGTATTAACAGACCGATTAGTCACGCTTTGCTTGCCGCTATTAGCTGCGCTAGCCTGCAGTCCTAGCTAAAAATAACGGAACGACTTCGACATGATGGAAGACACTAATTTCATCCGTCTTCCGCCTGAAACATAGGCCTAGCCAGACAGCTAAATCTG
EDM16428
5.65E-05
metadherin, isoform CRA_a [Rattus norvegicus]
NM_001107990
1.42153
Rattus norvegicus ciliary rootlet coiled-coil, rootletin (predicted) (Crocc_predicted), mRNA
NP_848927
92140
NP_001007136
368910
UF_Msa_AD_200004
LMB_Add_86
LMB_Add_86
TATCAAGACAAAGGACGGAGAGTCTGAGGTCCTCAACAAGCTTTACAGTCGCGCTCCTGAGGCCAATGACACCCTGCAGCAGAAGTTCACACAGTTCTCCAATGAGACTGGCATACTTCCCGGAA
CAF97961
1.70E-06
unnamed protein product [Tetraodon nigroviridis]
CR701165
0.477033
Tetraodon nigroviridis full-length cDNA
NP_001624
259
NP_001074123
791172
zgc:153154 /
GO:0006629; lipid metabolic process GO:0006810; transport
GO:0005575; cellular_component
GO:0005488; binding GO:0005215; transporter activity
UF_Msa_AD_200005
LMB_Add_85
LMB_Add_85
ACGGCCGCATATCGTTCAAAGGCTTCAATCCAGAAGTTGAGAAACTGATGGCGCTGATGAACCCGAAGGACGAAGAGGAGGAAGGAGAGGAGGAGGAGGAGATCAGCAGGATGCAGACAGACGTGACAGACGAAGAAATGGCTTTGAGGT
NP_001003618
1.50E-07
hypothetical protein LOC445224 [Danio rerio] >gi|125855473|ref|XP_001330938.1| PREDICTED: hypothetical protein [Danio rerio] >gi|50418142|gb|AAH78314.1| Zgc:100960 [Danio rerio]
XM_001080959
0.591705
PREDICTED: Rattus norvegicus M phase phosphoprotein 6 (predicted) (Mphosph6_predicted), mRNA
NP_005783
10200
XP_001330938
792270
zgc:100960 /
GO:0008150; biological_process
GO:0005575; cellular_component
GO:0003674; molecular_function
UF_Msa_AD_200006
AY619695
AY619695
AY619695 TTCGACAAGGACAACATTCCTGACATCACCGACTCCCTCATTGACCACTGTGAGGACAGGAANCTGGATGAGAACTCCAATGTCCAGGTGTCCGATGACCAGATTGTAGGAATTGTCAATGACCTGTTTGGAGCTGGTTTTGACACTGTCTCCACTGCCCTGTCTTGGTCAGTGATGTACTTGGTTGCTTACCCAGAGATACAGGAAAGGCTTTATCAAGATCTGAAGGACAAAGTGAGTGTGGATCGCAGTCCTCGTCTCTCTGATAGACCCAACTTGCCATTTCTTGAGGCTTTCATCCTGGAGATGCTTCGCCATTCTTCATTCCTGCCCTTCACTATCCCACACTGCACGACAAAAGACACGTCTCTGAATGGCTACTTCATCCCCAAAGACACCTGTGTCTTCATCAATCAGTGGCAGATCAACCATGATCCGGAGTTGTGGAAAGATCCGTCTTCATTCAACCCAGACCGCTTCCTGAGTGCTGATGGCACTGAACTCAACAAGTTGGAGGGGGAGAAGGTTATGACTTTTGGCTTGGGAAAGCGGCGCTGCATCGGCGAGGTCTTTGCACGAAATGAAGTCTACCTCTTTTTGGCAATCATGGTCCAGAAGCTGCACTTCAGCACAATTCCTGGAGAGCCGCTGGACTTGACCCCAGAATACGGTCTCACAATGAAGCACAAGCGCTGC
AAT85609
0
cytochrome P450 1A [Micropterus salmoides]
AY619695
0
Micropterus salmoides cytochrome P450 1A mRNA, partial cds
NP_000752
1544
NP_571954
140634
cytochrome P450, family 1, subfamily A /
GO:0006118; electron transport GO:0006725; aromatic compound metabolic process GO:0009410; response to xenobiotic stimulus GO:0042221; response to chemical stimulus GO:0006783; heme biosynthetic process GO:0006826; iron ion transport GO:0006879; cellular iron ion homeostasis
GO:0020037; heme binding GO:0016712; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavop GO:0005506; iron ion binding GO:0016491; oxidoreductase activity GO:0046872; metal ion binding GO:0004497; monooxygenase activity
UF_Msa_AD_200007
LMB_Add_84
LMB_Add_84
ACCAAACCAAGCACGCCGCTGAGATGGAAAGTCTGAAGGCCAAGGTGGAGCCCCTTGTGGAGCAGCTGAAGGCCAAGGTAGCTGTTCAACGTGGAGGAGACAAGACCGCCATGATGCCCATTGTGGAGGGTGTGCGTGAGAAGCTCTCTGA
CAH59609
3.70E-06
apolipoprotein AI precursor [Platichthys flesus]
AY735164
0.038191
Fundulus heteroclitus apolipoprotein A1 mRNA, partial cds
NP_057323
51168
NP_571203
30355
UF_Msa_AD_200008
LMB_Add_102
LMB_Add_102
ACATCTAACAAACATCATAGATATCAATTTACAGACTACACAGCTGCATTTTATTCATTTTAATGTGCTTTATCTGCAGTTCAGGGAGCCACTGCTTCCCTGTTTATATTTCCTTACAGGATAAAAAATGAGTCTCGAAAGTTGTGTAATGTGAACATGAGGCAGTGCAGCCTTTTTGACAACAACCTGCACTCAAACTGCATTAAAAAGCAACAATAATGTCACATTGATCAGAATGATGATGATGAATGTGTAGTAAGAATCACTCTAAAGGTCTTTGACTGAAATCTGCATTTTAAAATTGGTAACAGAAATGTCAGATTAGACTAACGATTGGTAAACACGATCATTTGCAAATAAAAAGCGCTTTCATTGTGATCATTTCCGCTGACAGGGCTTTACAAAGCCAGATAAACAGCCCGGGAATTACCTCCACAAGCAGCTCCCCCGGTGCAGCCTTTAATTTGAGCACCATAGACATTTACATGAGGTTTTGTCCCAGTGATTAAGGCCTGCAAGGCTCTGTGTCACGTTTATTGTCCTTAATTATAGAGCTGAACATCTGTATTCAGAGTGTGTGGACTGAGGAAAGTGCAGGCAGTGAGGCAGAGACACTTGTGGCTGTCAACAGGTCCCAAACATCC
No Hit
AC003074
0.182679
Homo sapiens PAC clone RP4-596O9 from 7, complete sequence
NP_689946
114781
XP_694003
565645
UF_Msa_AD_200009
LMB_Add_83
LMB_Add_83
ACAAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGCAACAGCTGTGCTTCAGTAAACACAGTGTTTATTCCATCAGATGTTTGGGTTGATAATCTTGCCCATGAACAGGACGTTTTCTGTGCTGCGTTCAGTGATGACGACCATAAATGGACGATTGAACTTCAAGACAGGGATGTGTTGGAAGGACATGAGGGTTATGCCAATGCCTGTGGCAGCTGCAGCGGTGGCTCCGACCTCATCGACATCCAGGGGTAGCTTGGTGAACAANCTCTGAGACTACCAGGTTTTGCGGTCTCTGAAATGCCACTCAAAATCTTGCACGATTCACCAAACATGTCTGTTC
CAE53392
6.54E-13
serine proteinase inhibitor [Platichthys flesus]
BT026991
9.81E-45
Gasterosteus aculeatus clone CFW140-B08 mRNA sequence
NP_006206
5267
NP_001025278
556938
zgc:113828 /
GO:0008150; biological_process
GO:0005575; cellular_component
GO:0004867; serine-type endopeptidase inhibitor activity
UF_Msa_AD_200010
LMB_Add_82
LMB_Add_82
CACCGGCCTCTCAGACCGCCACCACCAAAACCACCACGCCGTCCACGCCCGTCTCCAACGTCCTCATCAACCCGTCTGTGATCGGCTCCAAGAACATCCTCATCACCACCAACATGGTGCTGCAGAACTCCGGCGGGGAGTCGCTGAAGAGGAAGCACGAAGACGACGACGACTACGACGCTTTATGACGGCGTGACTGAAATAAAAACGCCACCTTTTTAATATCCCCTAATGTTCCCACCGGGAGTCGACCAGT
CAF97347
1.10E-09
unnamed protein product [Tetraodon nigroviridis]
DQ768754
0
Sander vitreus TATA binding protein associated factor 9 mRNA, complete cds
XP_001126120
728198
NP_001037860
321485
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor /
GO:0006352; transcription initiation
GO:0005669; transcription factor TFIID complex
GO:0003677; DNA binding
UF_Msa_AD_200011
LMB_Add_81
LMB_Add_81
ACATTACATGACAGAAGAATATTCATTCATCAGAGGATGTGTTGGTAGTCATGATGACATTTATCTGTTGCACAGATCACCCCTGCAGCAAGAGGCAATTGATACACCTGGTTGATTCAGCAGTGCACAGTCTCTTGCTTTCATGCAACCCTTGAAGTAGCTGGGAGTGGATCCAGCAGTAAAGATGACACCGGCACAGACATCGCTTGAAGGTGGGCAGGTCTCCACACGGTCTGGACAGCGGCGCAGGCCTCCACAGTAACACTTCAAGGCTTCACTCTGGCTGACAGCCAAAAATACAAACAGAGCAAGAATCACAATCTTCATTTTTTCACAATGTCACGCCTCTGCACACAAGTCACTGAATGAAGCTGATGAATTATCCTGC
ABE02825
1.02E-24
drtp1 [Pseudosciaena crocea]
DQ447886
5.95E-28
Pseudosciaena crocea drtp1 mRNA, complete cds
NP_598005
171169
XP_700928
572153
UF_Msa_AD_200012
LMB_Add_159
LMB_Add_159
GTGAAATGCATATTGGGTTGTTAATTTTTGGCATTTATAAGGTTGCTGTTTAGGAGCTTTTACATCAGCTCCTGCTTGGAGGTGTGCTACCATGTAATGGATGATCTAAAATAAGGAAGTCAAATTGTTCACTTTATAACTTCCCATAACCTCAAATTTCACAGCTCTTTTATATGTTGTAGTGAAATGAATGAAAACCAATAGCTGCCTTTTGAAGGTAGAGAATCAGGAAATCTAAAAACTAAACTCTTTGTAAAGTGGTTTGCAGAAATGTCAAATATAGGTGGTTTTGTTAATTGGCTCAAACATAGTATGTTGAGTTTGTTTTTGCTGAAGTAGTATTCATGCATCTCTACTCGTCACTTAGGATGTAGACAGTGTGCTATTTAAATAGCATAAGAAACGTGTTTGTGTAATGTGTTAGATGGGAGT
ZP_01182528
2.14573
conserved hypothetical protein [Bacillus weihenstephanensis KBAB4] >gi|89158080|gb|EAR78070.1| conserved hypothetical protein [Bacillus weihenstephanensis KBAB4]
AP008212
0.120415
Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
NP_065228
9457
NP_001073126
780837
UF_Msa_AD_200013
LMB_Add_81
LMB_Add_81
ACATTACATGACAGAAGAATATTCATTCATCAGAGGATGTGTTGGTAGTCATGATGACATTTATCTGTTGCACAGATCACCCCTGCAGCAAGAGGCAATTGATACACCTGGTTGATTCAGCAGTGCACAGTCTCTTGCTTTCATGCAACCCTTGAAGTAGCTGGGAGTGGATCCAGCAGTAAAGATGACACCGGCACAGACATCGCTTGAAGGTGGGCAGGTCTCCACACGGTCTGGACAGCGGCGCAGGCCTCCACAGTAACACTTCAAGGCTTCACTCTGGCTGACAGCCAAAAATACAAACAGAGCAAGAATCACAATCTTCATTTTTTCACAATGTCACGCCTCTGCACACAAGTCACTGAATGAAGCTGATGAATTATCCTGC
ABE02825
1.02E-24
drtp1 [Pseudosciaena crocea]
DQ447886
5.95E-28
Pseudosciaena crocea drtp1 mRNA, complete cds
NP_598005
171169
XP_700928
572153
UF_Msa_AD_200014
LMB_Add_158
LMB_Add_158
ACTCCAAAAGCTATTTGGAGTTACATTTAGACAGCCAAGTAGACAATTTAATACATTTAGCAAAAGAAAAAAAAAGAAAAAAATACACAAATAACCTAAATTAGATTCCTGCTGGCCTGTTCAAAAGACAAATTCCACATTGCATTTTACCAAACCAACAGATTTGTTTCTAGCATACAGCTGTATAATTACAAAGAAATTGCTCTCCCATTTCATATAATATGAAGGTTACAAAATTCCCTGATGCATAGAGTTGGGATAAAGAAAAGAAAAACATCTTTGCTTCAAATGGGGTGGGGAAAGTAGGGAGGTAGTTTTTAAATAAGCCACAATACTACAAAACTACAATATTTACAGAAAAAGTTAACGAAAAGTCAAATAAACTAAACTTCACACCCTCCCACTACCAATTTTTGGGAGGGGTCGCTGCTCAGCGGTGCTCTGCCCACTGCGTCCTCGGCCCCTGAA
EDO60928
7.72233
hypothetical protein CLOLEP_02540 [Clostridium leptum DSM 753]
AC123722
0.130988
Mus musculus chromosome 5, clone RP23-424O22, complete sequence
NP_775735
91133
NP_956168
334210
UF_Msa_AD_200015
LMB_Add_80
LMB_Add_80
ACAATAACAAGTGCTTCTTCAATTTATTTATTTTTTTAAAGTTCATAGAAAGTATAACTGACGCTGCACAATGCAAACATGAAAACAGCCAGACCAAGAAGCATCCCTTTACTCAAAGCTAGACAGGAAATTCAACACAGTCTGCTTGAGCCTAGCATCAGATGCCTCTGAGATTTTGCCATCAGCCCTAATAGCTGCCAGCAGGTCTTGGTGCTGGCTCAGTATGCG
CAF96443
5.99E-11
unnamed protein product [Tetraodon nigroviridis]
CR726794
1.79E-14
Tetraodon nigroviridis full-length cDNA
NP_001001937
498
NP_001070823
553755
ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle /
GO:0006754; ATP biosynthetic process GO:0006810; transport GO:0015986; ATP synthesis coupled proton transport
GO:0016469; proton-transporting two-sector ATPase complex GO:0045261; proton-transporting ATP synthase complex, catalytic core F(1)
GO:0016820; hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances GO:0046933; hydrogen ion transporting ATP synthase activity, rotational mechanism GO:0005524; ATP binding GO:0046961; hydrogen ion transporting ATPase activity, rotational mechanism GO:0016787; hydrolase activity GO:0000166; nucleotide binding
UF_Msa_AD_200016
AF080250
AF080250
AF080250 AGCCTTGACAAAGCGCTGTACGGTGGAAAAGATGCAACTACTTATTTCGTCAAAGAGCATTATCCCGTGGGTTGGTTTACCAAACTGCCTACGGCTGCCACAAAAACTTCTGGTACGCCTGCTTTCGGACAGCACTTTTCCGTAGGAGTGCCCAGGTCGGGCGACTATGTGCTCAACTCTTGGCTGGTCCTCAAGACCCCTCAGATTAAACTGCTGGCGGCCAACCAGTTTAACGCAAACGGTACCATCAGATGGACCAAAAATCTCATGCACAACGTTGTGGAGCACGCCGCACTCTCGTTCAACGAGATTCAGGCCCAGCAGTTTAACACTGCTTTCCTGGATGCCTGGAACGAGTACACCATGCCCGAGGCCAAGCGCATCGGGTATTACAACATGATTGGCAACACTAGCGATCTCGTCAATCCCGCCCCCGCCACCGATCAAGCAGGAGCTAGGGTCCTGCCCGCCAAAAACCTTGTCCTTCCTCTCCCC
AAC29488
0
major capsid protein [largemouth bass ranavirus]
AF080250
0
Largemouth bass ranavirus major capsid protein gene, partial cds
NP_064511
56848
XP_692568
564120
UF_Msa_AD_200017
LMB_Add_157
LMB_Add_157
ACCGAGTTTTGGTCAATACAGAGCACAATAAATGCTGTAATAGTCAACATGATACATTCAATTATATTGTGTTCTTTTTAAAATTAAAAACTTTGCGGCTCATAAAAGGGTTATTTTTCCTATTAGGGTTTTTTGTAAATCTCTTTACAGAATAACTTGTATCGAAACACCAAAAAGTGTTTTTAAAATCCATGTGTTTGGTAAAACAGAGTCGACTGTGGTTGCTTGTGCAGCATCACGACACACAGCGATNAACTCAGAGACTTTATTCAAAGAGGT
XP_001276190
0.69165
1-aminocyclopropane-1-carboxylate deaminase, putative [Aspergillus clavatus NRRL 1] >gi|119404388|gb|EAW14764.1| 1-aminocyclopropane-1-carboxylate deaminase, putative [Aspergillus clavatus NRRL 1]
AC182458
0.298249
Mus musculus BAC clone RP23-14N12 from chromosome 8, complete sequence
XP_001126010
23514
XP_684689
556724
UF_Msa_AD_200018
LMB_Add_56
LMB_Add_56
ACACTTTAGGAATGACGGGATCTTTTCCCTGAATATCCTGTCGACTTTTTTTGACAAAAAGGTTCCTTCCAGCTGTCAAAACCCAGCGATCAGAGATGAGAGCACCACCTGCAAAGCCTCCGTCCAGCACACTGTCAGCAATGTAGACCATGGCCTGCCAGGGGACATGAGGAGCCAAAGTCCCCCCAACCATTCGCCTGGGACGGAGTAATTCTGACCTGGAAGCCGACACAGAGCGTTTCATCCCTTCTTCGCTGTGAGTCACATCTGCCAGACAGGCCCATGCAGC
CAF94447
1.05E-33
unnamed protein product [Tetraodon nigroviridis]
DQ850485
4.34E-28
Lithognathus mormyrus clone lmos8p07b07 mRNA sequence
NP_001724
715
XP_694456
566096
UF_Msa_AD_200019
LMB_Add_156
LMB_Add_156
AGACATGTATGAGTGGAAGAAGAGAGCTCAATGAGAGCAATAAAAAGAATGCATAAGGCACCGTTTTAAATCTTGTGATGAAGAAAAAAAATTGGTTTGGCATATTACAAAAGAGGAGCAGCAGCTGTAAAATGTTCACTTAATGTTGACAGACAGGCTGATTTGCTGTTCT
No Hit
CU138576
0.0112265
Zebrafish DNA sequence from clone CH73-152D7 in linkage group 21, complete sequence
NP_006346
10475
UF_Msa_AD_200020
LMB_Add_155
LMB_Add_155
ACCAAAATCCCTCTTTCAAAGAAATCGCTGGAACACAAATATACATTCAAAACTCCCAACAGAGATACTTTACAGGAACAAGCACTTTGTTCATTTGAGACAAACACTATTACAAGAACAAAAGAATAGACAGAAGAAGAAGAATAGACAAACAAAAGTAAAAATGAAATGTAAGTCAGTAGCTGTAGCAATAATCCGTTTGTGAGGCACGTCTGTGGGAGCTGTAATTGGCTGATGACATGTCTGACTTTTGGGGTCAGAAGTTACTGTTCAACAGGATCAGAGGTGGAGGCGCCCCTGACTGCGCCTGGTGTGGAGAGGAACCTTAGGTATTTCTGGACTGCCGAACGGTGAGAGTTCAAGTGAATTCTCTTTGTCAGCGGAATTGTTATGGCGATGCTGGGCAAACTTTCTCTTTAGTGCTTCAGCAATAAGAGCCGCTGGGTCACCAAGCAATGCTGCACCTCCCTTACTGCGTCTCCTTCTG
NP_001070753
6.92E-09
hypothetical protein LOC768141 [Danio rerio] >gi|115527839|gb|AAI24771.1| Zgc:153910 [Danio rerio]
CR715705
1.14E-23
Tetraodon nigroviridis full-length cDNA
NP_612428
113115
NP_001070753
768141
zgc:153910 /
GO:0008150; biological_process
GO:0005575; cellular_component
GO:0003674; molecular_function
15208 6752 Kbytes .Supplementary data files not provided
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