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Status
Public on Jun 01, 2011
Title
Agilent-028298 Embryogene Bovine 45K microarray
Technology type
in situ oligonucleotide
Distribution
non-commercial
Organism
Bos taurus Manufacturer
Agilent Technologie
Manufacture protocol
www.chem.agilent.com
Submission date
Feb 25, 2011
Last update date
Jun 01, 2011
Contact name
Marc-André Sirard
E-mail(s)
Marc-Andre.Sirard@fsaa.ulaval.ca Organization name
Université Laval
Department
Sciences Animales
Street address
Offfice 2732, 2440 Hochelaga Blvd.
City
Québec City
State/province
Quebec
ZIP/Postal code
G1V 0A6
Country
Canada
Samples (663)
GSM679915 , GSM679916 , GSM679917 , GSM679918 , GSM679919 , GSM679920
GSM818284 ,
GSM818285 ,
GSM818286 ,
GSM818287 ,
GSM818288 ,
GSM818289 ,
GSM818290 ,
GSM818291 ,
GSM823814 ,
GSM823815 ,
GSM823816 ,
GSM823817 ,
GSM823818 ,
GSM823819 ,
GSM823820 ,
GSM823821 ,
GSM823822 ,
GSM823823 ,
GSM823824 ,
GSM823825 ,
GSM823826 ,
GSM823827 ,
GSM823828 ,
GSM823829 ,
GSM823830 ,
GSM823831 ,
GSM823832 ,
GSM823833 ,
GSM823834 ,
GSM823835 ,
GSM823836 ,
GSM823837 ,
GSM823838 ,
GSM823839 ,
GSM823840 ,
GSM823841 ,
GSM823842 ,
GSM823843 ,
GSM859561 ,
GSM859562 ,
GSM859563 ,
GSM859564 ,
GSM859565 ,
GSM859566 ,
GSM860929 ,
GSM860930 ,
GSM860931 ,
GSM860932 ,
GSM860933 ,
GSM860934 ,
GSM860935 ,
GSM860936 ,
GSM931309 ,
GSM931310 ,
GSM931311 ,
GSM931312 ,
GSM931313 ,
GSM931314 ,
GSM931315 ,
GSM931316 ,
GSM931317 ,
GSM931318 ,
GSM931319 ,
GSM931320 ,
GSM940352 ,
GSM940353 ,
GSM940354 ,
GSM940355 ,
GSM940356 ,
GSM940357 ,
GSM940358 ,
GSM940359 ,
GSM940360 ,
GSM940361 ,
GSM940362 ,
GSM940363 ,
GSM940364 ,
GSM940365 ,
GSM940366 ,
GSM940367 ,
GSM940368 ,
GSM940369 ,
GSM940370 ,
GSM940371 ,
GSM940372 ,
GSM940373 ,
GSM940374 ,
GSM940375 ,
GSM940376 ,
GSM940377 ,
GSM940378 ,
GSM940379 ,
GSM940380 ,
GSM940381 ,
GSM940382 ,
GSM940383 ,
GSM940384 ,
GSM940385 ,
GSM940386 ,
GSM940387 ,
GSM995521 ,
GSM995522 ,
GSM995523 ,
GSM995524 ,
GSM998944 ,
GSM998945 ,
GSM998946 ,
GSM998947 ,
GSM1004739 ,
GSM1004740 ,
GSM1004741 ,
GSM1004742 ,
GSM1004743 ,
GSM1004744 ,
GSM1004745 ,
GSM1004746 ,
GSM1004747 ,
GSM1004748 ,
GSM1004749 ,
GSM1004750 ,
GSM1004751 ,
GSM1004752 ,
GSM1004753 ,
GSM1004754 ,
GSM1004755 ,
GSM1004756 ,
GSM1004757 ,
GSM1004758 ,
GSM1004759 ,
GSM1004760 ,
GSM1004761 ,
GSM1004762 ,
GSM1004763 ,
GSM1004764 ,
GSM1004765 ,
GSM1004766 ,
GSM1004767 ,
GSM1004768 ,
GSM1004769 ,
GSM1004770 ,
GSM1004771 ,
GSM1004772 ,
GSM1004773 ,
GSM1004774 ,
GSM1018055 ,
GSM1018056 ,
GSM1018057 ,
GSM1018058 ,
GSM1018059 ,
GSM1018060 ,
GSM1018144 ,
GSM1018145 ,
GSM1018146 ,
GSM1018147 ,
GSM1018148 ,
GSM1018149 ,
GSM1036883 ,
GSM1036884 ,
GSM1036885 ,
GSM1036886 ,
GSM1036887 ,
GSM1036888 ,
GSM1036889 ,
GSM1036890 ,
GSM1036891 ,
GSM1036892 ,
GSM1036893 ,
GSM1036894 ,
GSM1036895 ,
GSM1036896 ,
GSM1036897 ,
GSM1036898 ,
GSM1088560 ,
GSM1088561 ,
GSM1088562 ,
GSM1088563 ,
GSM1088564 ,
GSM1088565 ,
GSM1103407 ,
GSM1103408 ,
GSM1103409 ,
GSM1103410 ,
GSM1103411 ,
GSM1103412 ,
GSM1127957 ,
GSM1127958 ,
GSM1127959 ,
GSM1127960 ,
GSM1127961 ,
GSM1127962 ,
GSM1127963 ,
GSM1127964 ,
GSM1127965 ,
GSM1127966 ,
GSM1127967 ,
GSM1127968 ,
GSM1127969 ,
GSM1127970 ,
GSM1127971 ,
GSM1127972 ,
GSM1127973 ,
GSM1127974 ,
GSM1127975 ,
GSM1127976 ,
GSM1127977 ,
GSM1127978 ,
GSM1127979 ,
GSM1127980 ,
GSM1127981 ,
GSM1127982 ,
GSM1127983 ,
GSM1127984 ,
GSM1127985 ,
GSM1127986 ,
GSM1127987 ,
GSM1127988 ,
GSM1127989 ,
GSM1127990 ,
GSM1127991 ,
GSM1127992 ,
GSM1174184 ,
GSM1174185 ,
GSM1174186 ,
GSM1174187 ,
GSM1174188 ,
GSM1174189 ,
GSM1174190 ,
GSM1174191 ,
GSM1174192 ,
GSM1174193 ,
GSM1174194 ,
GSM1174195 ,
GSM1174196 ,
GSM1174197 ,
GSM1174198 ,
GSM1174199 ,
GSM1174200 ,
GSM1174201 ,
GSM1176727 ,
GSM1176728 ,
GSM1176729 ,
GSM1176730 ,
GSM1176731 ,
GSM1176732 ,
GSM1176733 ,
GSM1176734 ,
GSM1176735 ,
GSM1176736 ,
GSM1176737 ,
GSM1176738 ,
GSM1176739 ,
GSM1176740 ,
GSM1176741 ,
GSM1176742 ,
GSM1198717 ,
GSM1198718 ,
GSM1198719 ,
GSM1198720 ,
GSM1198721 ,
GSM1198722 ,
GSM1198723 ,
GSM1198724 ,
GSM1198725 ,
GSM1198726 ,
GSM1198727 ,
GSM1198728 ,
GSM1198729 ,
GSM1198730 ,
GSM1198731 ,
GSM1198732 ,
GSM1198733 ,
GSM1198734 ,
GSM1225004 ,
GSM1225005 ,
GSM1225006 ,
GSM1225007 ,
GSM1225008 ,
GSM1225009 ,
GSM1225010 ,
GSM1225011 ,
GSM1231161 ,
GSM1231162 ,
GSM1231163 ,
GSM1231164 ,
GSM1231165 ,
GSM1231166 ,
GSM1231167 ,
GSM1231168 ,
GSM1231169 ,
GSM1267688 ,
GSM1267689 ,
GSM1267690 ,
GSM1267691 ,
GSM1267692 ,
GSM1267693 ,
GSM1303335 ,
GSM1303336 ,
GSM1303337 ,
GSM1303338 ,
GSM1303339 ,
GSM1303340 ,
GSM1303341 ,
GSM1303342 ,
GSM1308608 ,
GSM1308609 ,
GSM1308610 ,
GSM1308611 ,
GSM1308612 ,
GSM1308613 ,
GSM1334734 ,
GSM1334735 ,
GSM1334736 ,
GSM1334737 ,
GSM1334738 ,
GSM1334739 ,
GSM1334740 ,
GSM1334741 ,
GSM1334742 ,
GSM1334743 ,
GSM1334744 ,
GSM1334745 ,
GSM1334776 ,
GSM1334777 ,
GSM1334778 ,
GSM1334779 ,
GSM1334780 ,
GSM1334781 ,
GSM1356652 ,
GSM1356653 ,
GSM1356654 ,
GSM1356655 ,
GSM1356656 ,
GSM1356657 ,
GSM1356658 ,
GSM1356659 ,
GSM1356660 ,
GSM1356661 ,
GSM1356662 ,
GSM1356663 ,
GSM1356664 ,
GSM1356665 ,
GSM1356666 ,
GSM1356667 ,
GSM1377840 ,
GSM1377841 ,
GSM1377842 ,
GSM1377843 ,
GSM1377844 ,
GSM1377845 ,
GSM1377846 ,
GSM1377847 ,
GSM1377848 ,
GSM1377849 ,
GSM1377850 ,
GSM1377851 ,
GSM1377852 ,
GSM1377853 ,
GSM1377854 ,
GSM1377855 ,
GSM1422104 ,
GSM1422105 ,
GSM1422106 ,
GSM1422107 ,
GSM1422108 ,
GSM1422109 ,
GSM1422110 ,
GSM1422111 ,
GSM1438477 ,
GSM1438478 ,
GSM1438479 ,
GSM1438480 ,
GSM1438481 ,
GSM1438482 ,
GSM1528758 ,
GSM1528759 ,
GSM1528760 ,
GSM1528761 ,
GSM1528762 ,
GSM1528763 ,
GSM1528764 ,
GSM1528765 ,
GSM1529725 ,
GSM1529726 ,
GSM1529727 ,
GSM1529728 ,
GSM1529729 ,
GSM1529730 ,
GSM1529731 ,
GSM1529732 ,
GSM1529733 ,
GSM1529734 ,
GSM1529735 ,
GSM1529736 ,
GSM1529737 ,
GSM1529738 ,
GSM1529739 ,
GSM1529740 ,
GSM1535594 ,
GSM1535595 ,
GSM1535596 ,
GSM1535597 ,
GSM1535598 ,
GSM1535599 ,
GSM1535600 ,
GSM1535601 ,
GSM1560272 ,
GSM1560273 ,
GSM1560274 ,
GSM1560275 ,
GSM1560276 ,
GSM1560277 ,
GSM1560278 ,
GSM1560279 ,
GSM1560349 ,
GSM1560350 ,
GSM1560351 ,
GSM1560352 ,
GSM1560353 ,
GSM1560354 ,
GSM1560355 ,
GSM1560356 ,
GSM1560357 ,
GSM1560358 ,
GSM1560359 ,
GSM1560360 ,
GSM1560361 ,
GSM1560362 ,
GSM1560363 ,
GSM1560364 ,
GSM1611661 ,
GSM1611662 ,
GSM1611663 ,
GSM1611664 ,
GSM1611665 ,
GSM1611666 ,
GSM1611667 ,
GSM1611668 ,
GSM1614648 ,
GSM1614649 ,
GSM1614650 ,
GSM1614651 ,
GSM1614652 ,
GSM1614653 ,
GSM1614654 ,
GSM1614655 ,
GSM1654285 ,
GSM1654286 ,
GSM1654287 ,
GSM1654288 ,
GSM1654289 ,
GSM1654290 ,
GSM1654291 ,
GSM1654292 ,
GSM1654293 ,
GSM1654294 ,
GSM1654295 ,
GSM1654296 ,
GSM1654297 ,
GSM1654298 ,
GSM1654299 ,
GSM1654300 ,
GSM1659836 ,
GSM1659837 ,
GSM1659838 ,
GSM1659839 ,
GSM1659840 ,
GSM1659841 ,
GSM1659842 ,
GSM1659843 ,
GSM1659844 ,
GSM1659845 ,
GSM1659846 ,
GSM1659847 ,
GSM1659848 ,
GSM1659849 ,
GSM1659850 ,
GSM1659851 ,
GSM1659852 ,
GSM1659853 ,
GSM1696081 ,
GSM1696082 ,
GSM1696083 ,
GSM1696084 ,
GSM1696085 ,
GSM1696086 ,
GSM1696087 ,
GSM1696088 ,
GSM1850300 ,
GSM1850301 ,
GSM1850302 ,
GSM1850303 ,
GSM1850304 ,
GSM1850305 ,
GSM1936155 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here Series (74)
GSE27530 Bovine in-vitro blastocysts vs granulosa cells
GSE33008 Differential Gene Expression Profile in Bovine Blastocysts Resulting from Hyperglycemia Exposure during Early Cleavage Stages
GSE33314 Gene expression analysis of bovine blastocyst produced under alternative in vivo and in vitro culture conditions during EGA time
GSE34958 Cellular and molecular characterization of the impact of laboratory setup on bovine in vitro embryo production
GSE35025 Transcriptome Analysis Of Bovine Expanded Blastocysts Produced In Vivo Vs In Vitro Sof Opu
GSE37986 Bovine Embryonic Developmental Competence Is Predicted By Expression Levels Of Genes Related To Oxidative Stress Response
GSE38345 Gene expression analysis of bovine oocytes with high developmental competence obtained from FSH-stimulated animals
GSE40521 High Glucose (HG) treated morula vs control glucose (CTL) treated morula
GSE40662 Deadenylated versus polyadenylated RNAs in bovine immature oocytes
GSE40916 Granulosa cell differentiation in vivo and developmental competence of oocytes in the bovine model
GSE41480 Bovine granulosa cell response to FGF18
GSE41489 Effect of FGF8 on bovine granulosa cells
GSE42279 AAPH-treated blastocysts vs CTL-treated blastocysts
GSE42280 BSO-treated blastocysts vs CTL-treated blastocysts
GSE42281 Transcriptomic signature in bovine blastocysts resulting from oxidative stress exposure at the time of embryonic genome activation
GSE44664 Gene expression analysis of bovine oocytes at optimal coasting time combined with GnRH antagonist during the no-FSH period
GSE45381 Super Vs Non
GSE46274 Effects of fertility on gene expression and function of the bovine endometrium
GSE48283 Microarray analysis of bovine oocyte from distinct follicle sizes reveals gradual transcripts accumulation
GSE48376 Chromatin remodeling and histone mRNA accumulation in bovine germinal vesicle oocytes
GSE49391 Blastocyst Formation
GSE50633 Rapidly cleaving bovine embryos have a better developmental potential and a distinctive mRNA pattern
GSE50854 Transcriptome analysis of Bovine granulosa cells of preovulatory follicles at 30, 60, 90 and 120 days postpartum
GSE52480 Maternal age related changes in transcriptome of bovine granulosa cells of the dominant follicle at the time of selection
GSE53905 The impact of exposure to serum lipids during in vitro culture on the transcriptome of bovine blastocysts
GSE54138 Effect of maternal age on the granulosa cell transcriptome of preovulatory dominant follicle in cattle
GSE55364 CSF2 x gender interactions on the transcriptome of Day 15 bovine extra-embryonic membrane
GSE55368 Cumulus High Vs. Low Potential
GSE56145 Changes in granulosa cells gene expression associated with growth, plateau and atretic phases in medium bovine follicles.
GSE57247 Trichostatin A does not correct specific errors of somatic cell nuclear transfer on the transcriptomic level; highlighing the non-random nature of oocyte-mediated reprogramming errors.
GSE58901 Gene expression profile of in vitro produced bovine blastocyst with and without Thyroid hormone supplementation
GSE59500 68hctrl_68hcetrotide
GSE62553 Comparison of Holstein and Jersey day 6 embryos
GSE62595 Comparison of L-carnitine treated day 6 in vivo bovine embryos to controls, in both the Jersey and Holstein breeds.
GSE62881 Influence Of Insulin On Oocyte Maturation In Invitro Produced Bovine Embryos
GSE63904 Bovine granulosa cells of dominant follicles; comparison of growing vs plateau
GSE63918 Bovine granulosa cells of dominant follicles; comparison of growing vs atretic
GSE63919 Bovine granulosa cells of dominant follicles; comparison of plateau vs atretic
GSE65953 Effect of vitrification using the Cryotop method on the gene expression profile of in vitro-produced bovine embryos
GSE66116 Bovine granulosa cells of dominant follicles at 60 days postpartum; effect of negative energy balance on transcriptome
GSE67686 The effect of maternal diets on transcriptome profiling of in vivo bovine pre-implantation embryos
GSE67968 Transcriptome analysis of cyclic AMP (cAMP) response in bovine cumulus cells
GSE67969 Transcriptome analysis of bovine cumulus cells during first 6 hrs of in vitro maturation
GSE67970 Transcriptome analysis of FSH response in bovine cumulus cells
GSE69247 Transcriptional effect of the luteinizing hormone surge in bovine granulosa cells during the peri-ovulation period
GSE72038 Effects of Intramuscular Administration of Folic Acid and Vitamin B12 on Granulosa Cells Gene Expression in Postpartum Dairy Cow
GSE74834 Effect of FSH on granulosa cell expression in cow.
GSE75430 Comparison of the transcription (coding and lncRNAs) of in vitro cultured bovine SAM-treated blastocysts and non-treated blastocysts
GSE75555 Transcriptome profiling of bovine inner cell mass and trophectoderm derived from in vivo generated blastocysts
GSE79760 Cumulus cell gene expression associated with pre-ovulatory acquisition of developmental competence in bovine oocytes
GSE79886 Bovine cumulus cells transcriptome in relation with oocyte chromatin configuration of the germinal vesicle
GSE80289 Transcriptome analysis of granulosa cells after conventional vs long FSH-induced superstimulation in cattle
GSE83767 Exposure of bovine oocytes and embryos to elevated non-esterified fatty acid concentrations: integration of epigenetic and transcriptomic signatures in resultant blastocysts [gene expression]
GSE83768 Exposure of bovine oocytes and embryos to elevated non-esterified fatty acid concentrations: integration of epigenetic and transcriptomic signatures in resultant blastocysts
GSE85436 Transcriptomic evaluation of bovine embryo quality on blastocysts obtained from peri-pubertal oocyte donors [8 mo vs 14 mo]
GSE85437 Transcriptomic evaluation of bovine embryo quality on blastocysts obtained from peri-pubertal oocyte donors [11 mo vs 14 mo]
GSE85438 Transcriptomic evaluation of bovine embryo quality on blastocysts obtained from peri-pubertal oocyte donors
GSE88893 Gene expression in granulosa cells from cows rated as poor donors of competent oocytes
GSE93703 Transcriptomic evaluation of bovine granulosa obtained from peri-pubertal oocyte donors
GSE95379 Transcriptomic differences in bovine blastocysts following vitrification and slow freezing at morula stage [EmbryocryovitSF]
GSE95380 Transcriptomic differences in bovine blastocysts following vitrification and slow freezing at morula stage [EmbryocryoVit]
GSE95381 Transcriptomic differences in bovine blastocysts following vitrification and slow freezing at morula stage [EmbryoCryoSF]
GSE95382 Transcriptomic differences in bovine blastocysts following vitrification and slow freezing at morula stage
GSE96925 Differences prevailing in bovine in vitro produced blastocysts in the view of their post-transfer phenotypes three days ahead of implantation
GSE110578 Gene expression in granulosa cells from heifers rated as poor donors of competent oocytes
GSE111990 Gene expression analysis of in vivo originated bovine embryos fllushed out at 2- or 8-cell stages and cultured in vitro till blastocyst stage
GSE119803 Effect of FSH on the gene expression profile of cumulus cells in vitro cultured as cumulus-oocyte complexes in presence of adenosine for 6 h
GSE119804 Effect of adenosine on the gene expression profile of cumulus cells in vitro cultured as cumulus-oocyte complexes for 6 h
GSE121783 The effects of basal LH inhibition with Cetrorelix on cumulus cell gene expression during the luteal phase under ovarian coasting stimulation in cattle.
GSE122601 Embryonic response to high beta-hydroxybutyrate (BHB) levels in postpartum dairy cows [gene expression]
GSE122646 Embryonic response to high beta-hydroxybutyrate (BHB) levels in postpartum dairy cows
GSE128355 Transcriptomic analysis of blastocyst according to peripubertal age of bull (10 vs 16 months)
GSE128356 Transcriptomic analysis of blastocyst according to peripubertal age of bull (12 vs 16 months)
GSE128629 The age of the bull influences the transcriptome and epigenome of the blastocysts
Data table header descriptions ID Target_Type Type of target
Gene_ID Gene Identification
ORF Gene_Symbol ORF Description Gene description
GB_RANGE SPOT_ID
Data table ID Target_Type Gene_ID ORF Gene_Symbol ORF Description GB_RANGE SPOT_ID EMBV3_00001
Control
NULL
NULL
NULL
NULL
EMBV3_00002
GENE
GeneID:282179
282179 CHRNB1
CHRNB1 cholinergic receptor, nicotinic, beta 1 (muscle)
EMBV3_00003
GENE
GeneID:508711
508711 GABRD
GABRD gamma-aminobutyric acid (GABA) A receptor, delta
EMBV3_00004
GENE
GeneID:100336536
100336536 LOC100336536
LOC100336536 hCG2029376-like
EMBV3_00005
GENE
GeneID:537951
537951 EPHA3
EPHA3 EPH receptor A3
EMBV3_00006
GENE
GeneID:538310
538310 EP400
EP400 E1A binding protein p400
EMBV3_00007
Exon_Alt
GeneID:508698
508698 HAUS2
HAUS2 HAUS augmin-like complex, subunit 2
EMBV3_00008
Control
NULL
NULL
NULL
NULL
EMBV3_00009
Control
NULL
NULL
NULL
NULL
EMBV3_00010
NTR
GK000023.2:7820914-7841999
NULL
Novel Transcribed Region; evidence: embryonic ESTs
GK000023.2:7820914-7841999
EMBV3_00011
GENE
GeneID:100295920
100295920 LOC100295920
LOC100295920 hypothetical protein LOC100295920
EMBV3_00012
NTR
GK000003.2:110109949-110118544
NULL
Novel Transcribed Region; evidence: embryonic ESTs
GK000003.2:110109949-110118544
EMBV3_00013
NTR
GK000005.2:23774519-24072281
NULL
Novel Transcribed Region; evidence: embryonic ESTs
GK000005.2:23774519-24072281
EMBV3_00014
GENE
GeneID:514797
514797 CLEC4E
CLEC4E C-type lectin domain family 4, member E
EMBV3_00015
Control
NULL
NULL
NULL
NULL
EMBV3_00016
GENE
GeneID:531678
531678 MGC139528
MGC139528 hypothetical LOC531678
EMBV3_00017
NTR
GK000021.2:40890805-41612768
NULL
Novel Transcribed Region; evidence: embryonic ESTs
GK000021.2:40890805-41612768
EMBV3_00018
GENE
GeneID:100335975
100335975 LOC100335975
LOC100335975 hypothetical protein LOC100335975
EMBV3_00019
Control
NULL
NULL
NULL
NULL
EMBV3_00020
Exon_Alt
GeneID:618684
618684 MBP
MBP myelin basic protein
43795 4210 Kbytes .Supplementary data files not provided
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