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Platform GPL10399 Query DataSets for GPL10399
Status Public on Jul 26, 2010
Title Illumina HumanRef-8 v3.0 [gene-centered version]
Technology type oligonucleotide beads
Distribution commercial
Organism Homo sapiens
Manufacturer Illumina Inc.
Manufacture protocol see manufacturer's website
 
Description The HumanRef-8 v3.0 Expression BeadChip features up-to-date content derived from the National Center for Biotechnology Information Reference Sequence (NCBI RefSeq) database (Build 36.2, Release 22).
Please use the GEO Data Submission Report Plug-in v1.0 for Gene Expression which may be downloaded from https://icom.illumina.com/icom/software.ilmn?id=234 to format the normalized and raw data. These should be submitted as part of a GEOarchive. Instructions for assembling a GEOarchive may be found at http://www.ncbi.nlm.nih.gov/projects/geo/info/spreadsheet.html
This platform is the gene-centered version of the original GPL6883 platform.
 
Submission date May 06, 2010
Last update date Mar 08, 2013
Contact name Lukas Chavez
E-mail(s) l.chavez@dkfz.de
Organization name German Cancer Research Center (DKFZ)
Street address Im Neuenheimer Feld 280
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Samples (273) GSM541732, GSM541733, GSM541734, GSM541735, GSM541736, GSM541737 
Series (7)
GSE21715 Computational analysis of genome-wide DNA-methylation during the differentiation of human embryonic stem cells along the endodermal lineage
GSE33220 Effects of the JADE-HBO1 complex on gene expression
GSE33221 Conserved molecular interactions within MYST-ING acetyltransferase complexes that regulate cell proliferation
Relations
Alternative to GPL6883

Data table header descriptions
ID
Species
Source
ORF Gene Symbol

Data table
ID Species Source ORF
JMJD1A Homo sapiens RefSeq JMJD1A
NCOA3 Homo sapiens RefSeq NCOA3
LOC389834 Homo sapiens RefSeq LOC389834
SPIRE2 Homo sapiens RefSeq SPIRE2
C17ORF77 Homo sapiens RefSeq C17orf77
NXT2 Homo sapiens RefSeq NXT2
CHKB Homo sapiens RefSeq CHKB
E2F5 Homo sapiens RefSeq E2F5
NTN2L Homo sapiens RefSeq NTN2L
TRAIP Homo sapiens RefSeq TRAIP
CSF3R Homo sapiens RefSeq CSF3R
ARL13A Homo sapiens RefSeq ARL13A
AMDHD1 Homo sapiens RefSeq AMDHD1
SDHAP3 Homo sapiens RefSeq SDHAP3
FLYWCH1 Homo sapiens RefSeq FLYWCH1
PSRC2 Homo sapiens RefSeq PSRC2
DUSP22 Homo sapiens RefSeq DUSP22
RSPO4 Homo sapiens RefSeq RSPO4
DUSP13 Homo sapiens RefSeq DUSP13
IL22 Homo sapiens RefSeq IL22

Total number of rows: 18630

Table truncated, full table size 608 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided

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